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SCNpilot_cont_300_bf_scaffold_1391_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1391_curated_1
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1..519)
DNA (519bp) protein (173aa)
restriction endonuclease S subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3]
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI00030FDB3A
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:AIL45391.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCNpilot_cont_300_bf_scaffold_1391_curated_2
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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659..1582
DNA (924bp) protein (308aa)
Site-specific recombinase, phage integrase family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWD0_9FLAO
Integrase {ECO:0000313|EMBL:AIL45396.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
intQ; integrase
SCNpilot_cont_300_bf_scaffold_1391_curated_3
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1658..4813
DNA (3156bp) protein (1052aa)
hsdR; type I restriction-modification system, R subunit (EC:3.1.21.3); K01153 type I restriction enzyme, R subunit [EC:3.1.21.3]
Type I restriction-modification system, R subunit n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6L721_SAPGL
Type I restriction-modification system, restriction subunit R {ECO:0000313|EMBL:AIL45397.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
SCNpilot_cont_300_bf_scaffold_1391_curated_4
Elizabethkingia anophelis, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4813..5505
DNA (693bp) protein (231aa)
Putative metal-dependent hydrolase {ECO:0000313|EMBL:AIL45398.1}; TaxID=1338011 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis NUHP1.;"
Putative uncharacterized protein id=4844716 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
metal-dependent hydrolase
SCNpilot_cont_300_bf_scaffold_1391_curated_5
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(6387..11816)
DNA (5430bp) protein (1810aa)
Uncharacterized protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUV1_HALH1
Uncharacterized protein {ECO:0000313|EMBL:GAE65832.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1391_curated_6
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11906..12757)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:GAE65831.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
Putative uncharacterized protein id=4473969 bin=GWF2_Bacteroidetes_35_48 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
cell wall surface anchor family protein
SCNpilot_cont_300_bf_scaffold_1391_curated_7
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12781..13371)
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W4Z9_9FLAO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFK35188.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
TetR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_1391_curated_8
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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13504..13944
DNA (441bp) protein (147aa)
Two-component system response regulator n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CN22_ELIME
Transcriptional regulator {ECO:0000313|EMBL:KFC21470.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
SCNpilot_cont_300_bf_scaffold_1391_curated_9
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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14181..15572
DNA (1392bp) protein (464aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
Signal transduction histidine kinase n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CMY6_ELIME
signal transduction histidine kinase
SCNpilot_cont_300_bf_scaffold_1391_curated_10
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15751..16242
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CNV0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KFC21468.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1391_curated_11
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16288..17136
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CU42_ELIME
Uncharacterized protein {ECO:0000313|EMBL:EOR30706.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1391_curated_12
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(17255..18223)
DNA (969bp) protein (323aa)
Thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase n=5 Tax=Riemerella anatipestifer RepID=E4TE51_RIEAD
Thioredoxin reductase {ECO:0000313|EMBL:KFC19159.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_300_bf_scaffold_1391_curated_13
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(18455..19492)
DNA (1038bp) protein (346aa)
DNA polymerase III, delta subunit n=1 Tax=Chryseobacterium sp. CF314 RepID=J2SSN9_9FLAO
DNA polymerase III subunit delta {ECO:0000313|EMBL:KFC21464.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1391_curated_14
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19501..19935
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X4K4_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KFC19155.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1391_curated_15
unknown

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comp(19947..20567)
DNA (621bp) protein (207aa)

This feature has no annotations

Displaying 15 items

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