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SCNpilot_cont_300_bf_scaffold_4123_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4123_curated_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..695)
DNA (693bp) protein (231aa)
transcriptional regulator n=1 Tax=Microbacterium yannicii RepID=UPI0002F746F2
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ73015.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_300_bf_scaffold_4123_curated_2
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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783..1367
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031A3A92
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:GAD33603.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins
SCNpilot_cont_300_bf_scaffold_4123_curated_3
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1375..1716)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WLY0_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EID77396.1}; TaxID=1165867 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4123_curated_4
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1825..2364
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00030B2CC7
Uncharacterized protein {ECO:0000313|EMBL:KDA05453.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4123_curated_5
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2379..2765)
DNA (387bp) protein (129aa)
ester cyclase n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255DFD3
Predicted ester cyclase {ECO:0000313|EMBL:CDJ99967.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ester cyclase
SCNpilot_cont_300_bf_scaffold_4123_curated_6
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2786..3340)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Arthrobacter sp. TB 23 RepID=UPI00031BA878
hypothetical protein; K09975 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL41445.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
SCNpilot_cont_300_bf_scaffold_4123_curated_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3444..4091
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00036726E6
NAD-dependent dehydratase {ECO:0000313|EMBL:KHK99935.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
NADH-flavin reductase
SCNpilot_cont_300_bf_scaffold_4123_curated_8
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4110..5777)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XNE4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAD34437.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_cont_300_bf_scaffold_4123_curated_9
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5841..7583
DNA (1743bp) protein (581aa)
hypothetical protein; K01114 phospholipase C [EC:3.1.4.3]
Phospholipase C n=1 Tax=Microbacterium sp. TS-1 RepID=U2YUY4_9MICO
Phospholipase C {ECO:0000313|EMBL:GAD34438.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
SCNpilot_cont_300_bf_scaffold_4123_curated_10
Curtobacterium flaccumfaciens, Curtobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(7601..7969)
DNA (369bp) protein (123aa)
glyoxalase n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B3C408
Glyoxalase {ECO:0000313|EMBL:EYT65205.1}; TaxID=1292022 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Curtobacterium.;" source="Curtobacterium flaccumfaciens UCD-AKU.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4123_curated_11
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8032..8490
DNA (459bp) protein (153aa)
MarR family transcriptional regulator n=1 Tax=Streptomyces sp. 351MFTsu5.1 RepID=UPI0003766D12
MarR family transcriptional regulator {ECO:0000313|EMBL:KFG00682.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
MarR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4123_curated_12
unknown

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comp(8505..8678)
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4123_curated_13
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8738..9253)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036ABADE
Regulatory protein TetR {ECO:0000313|EMBL:CDK00179.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
TetR family transcriptional regulator
Displaying 13 items

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