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SCNpilot_cont_300_bf_scaffold_18840_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_18840_curated_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2..361
DNA (360bp) protein (120aa)
Extracellular ligand-binding receptor n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJN5_PSEUX
ABC transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
Extracellular ligand-binding receptor {ECO:0000313|EMBL:AEA25895.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_300_bf_scaffold_18840_curated_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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423..1307
DNA (885bp) protein (295aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJP4_PSEUX
ABC transporter permease; K01997 branched-chain amino acid transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA25904.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_300_bf_scaffold_18840_curated_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1304..2323
DNA (1020bp) protein (340aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJP3_PSEUX
ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA25903.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
SCNpilot_cont_300_bf_scaffold_18840_curated_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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2320..3060
DNA (741bp) protein (247aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=14625074 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
SCNpilot_cont_300_bf_scaffold_18840_curated_5

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3060..3728
DNA (669bp) protein (223aa)
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) n=1 Tax=mine drainage metagenome RepID=E6PPM4_9ZZZZ
High-affinity branched-chain amino acid transport ATP-binding protein livF (LIV-I protein F) {ECO:0000313|EMBL:CBH96878.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_18840_curated_6
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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3728..4474
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:CCG04293.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CCG04293.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RSZ0_BLASD
fabG5; 3-oxoacyl-ACP reductase
SCNpilot_cont_300_bf_scaffold_18840_curated_7
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4444..5268)
DNA (825bp) protein (275aa)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QVA2_9BRAD
Short-chain dehydrogenase {ECO:0000313|EMBL:KDA05327.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_18840_curated_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5265..5834)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00037B3AFB
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AGZ41416.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying 8 items

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