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SCNpilot_cont_300_bf_scaffold_9152_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_9152_curated_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..836)
DNA (834bp) protein (278aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
GTPase; K06949 ribosome biogenesis GTPase [EC:3.6.1.-]
ribosome small subunit-dependent GTPase A n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003621DAE
SCNpilot_cont_300_bf_scaffold_9152_curated_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(851..2209)
DNA (1359bp) protein (453aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
5-enolpyruvylshikimate-3-phosphate synthase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031C5ECD
SCNpilot_cont_300_bf_scaffold_9152_curated_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2246..2914
DNA (669bp) protein (223aa)
RNA polymerase sigma factor RpoE n=1 Tax=Microbacterium yannicii RepID=UPI0003195C84
ECF RNA polymerase sigma factor SigR {ECO:0000313|EMBL:KJL35648.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
sigH; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily
SCNpilot_cont_300_bf_scaffold_9152_curated_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2911..3153
DNA (243bp) protein (81aa)
Predicted transmembrane transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NBL3_MICTS
transmembrane transcriptional regulator
Predicted transmembrane transcriptional regulator {ECO:0000313|EMBL:BAJ73473.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_300_bf_scaffold_9152_curated_5
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3181..4086)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036F875B
Diacylglycerol kinase {ECO:0000313|EMBL:KIC58276.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein; K07029
SCNpilot_cont_300_bf_scaffold_9152_curated_6
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4083..5489)
DNA (1407bp) protein (469aa)
hypothetical protein; K00803 alkyldihydroxyacetonephosphate synthase [EC:2.5.1.26] rbh
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000378EF5E
Uncharacterized protein {ECO:0000313|EMBL:BAD56190.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying 6 items

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