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SCNpilot_cont_300_bf_scaffold_16688_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_16688_curated_1
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..465)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Bacillus sp. EGD-AK10 RepID=U1YJ13_9BACI
Glycine/betaine ABC transporter {ECO:0000313|EMBL:KHK98512.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
osmoprotectant (glycine betaine/carnitine/choline/L-proline) ABC transporter substrate-binding protein; K05845 osmoprotectant transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_16688_curated_2
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(527..1276)
DNA (750bp) protein (250aa)
glycine/betaine ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BD61A
Glycine/betaine ABC transporter permease {ECO:0000313|EMBL:KEP75171.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
glycine/betaine ABC transporter permease; K05846 osmoprotectant transport system permease protein
SCNpilot_cont_300_bf_scaffold_16688_curated_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1273..1962)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349D75F
ABC transporter permease {ECO:0000313|EMBL:KHK98514.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
glycine/betaine ABC transporter permease; K05846 osmoprotectant transport system permease protein
SCNpilot_cont_300_bf_scaffold_16688_curated_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(1959..2813)
DNA (855bp) protein (285aa)
ABC-type proline/glycine betaine transport systems, ATPase components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAP4_MICTS
glycine/betaine ABC transporter ATPase; K05847 osmoprotectant transport system ATP-binding protein
ABC-type proline/glycine betaine transport systems, ATPase components {ECO:0000313|EMBL:BAJ75911.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_300_bf_scaffold_16688_curated_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2836..3138)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B6207D
Uncharacterized protein {ECO:0000313|EMBL:KJL35050.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_16688_curated_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3306..4628)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E60E45
Enhanced intracellular survival protein {ECO:0000313|EMBL:KJL35051.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
acetyltransferase
SCNpilot_cont_300_bf_scaffold_16688_curated_7
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4674..5630)
DNA (957bp) protein (319aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E453F2
SCNpilot_cont_300_bf_scaffold_16688_curated_8
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5606..6673)
DNA (1068bp) protein (356aa)
L-glyceraldehyde 3-phosphate reductase n=1 Tax=Microbacterium barkeri RepID=UPI0002EA89DF
Aldo-keto reductase {ECO:0000313|EMBL:CDK01059.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
oxidoreductase
SCNpilot_cont_300_bf_scaffold_16688_curated_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(6683..7546)
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=582680 species="Bacteria; Actinobacteria
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
16S rRNA methyltransferase n=1 Tax=Microbacterium yannicii RepID=UPI0002E3B1BC
SCNpilot_cont_300_bf_scaffold_16688_curated_10
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7618..9096
DNA (1479bp) protein (493aa)
major facilitator transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037660A2
Major facilitator transporter {ECO:0000313|EMBL:KHK98518.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
permease of the major facilitator superfamily
SCNpilot_cont_300_bf_scaffold_16688_curated_11
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9134..9916
DNA (783bp) protein (261aa)
antibiotic transporter n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036B4AB6
Uncharacterized protein {ECO:0000313|EMBL:EPD85260.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
major facilitator superfamily protein
Displaying 11 items

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