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scnpilot_dereplicated_Microbacterium_2

scnpilot-dereplicated_Microbacterium_70_1
In projects: scnpilot-dereplicated  |  SCNPILOT_CONT_300_BF

Consensus taxonomy: Microbacterium  →  Actinomycetales  →  Actinobacteridae  →  Actinobacteria  →  Bacteria

Displaying items 501-550 of 598 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
SCNpilot_cont_300_bf_scaffold_479_curated
Class: Actinobacteria (64.29%)
56 57239 bp 68.22 1.00 91.28
SCNpilot_cont_300_bf_scaffold_9790_curated
Genus: Microbacterium (75%)
8 7362 bp 71.68 1.00 92.75
SCNpilot_cont_300_bf_scaffold_72031_curated
Species: Microbacterium mangrovi (100%)
1 1288 bp 68.40 1.00 99.69
SCNpilot_cont_300_bf_scaffold_54884_curated
Species: Microbacterium mangrovi (100%)
1 1077 bp 67.97 1.00 100.00
SCNpilot_cont_300_bf_scaffold_29961_curated
Genus: Microbacterium (100%)
4 2269 bp 70.47 1.00 95.20
SCNpilot_cont_300_bf_scaffold_9092_curated
Genus: Microbacterium (80%)
5 4982 bp 70.69 1.00 96.83
SCNpilot_cont_300_bf_scaffold_21274_curated
Genus: Microbacterium (100%)
4 4319 bp 74.09 1.00 98.43
SCNpilot_cont_300_bf_scaffold_12859_curated
Genus: Microbacterium (100%)
4 4340 bp 71.36 1.00 88.00
SCNpilot_cont_300_bf_scaffold_54409_curated
Species: Microbacterium mangrovi (100%)
1 1084 bp 70.85 1.00 99.08
SCNpilot_cont_300_bf_scaffold_9152_curated
Genus: Microbacterium (83.33%)
6 5489 bp 71.87 1.00 98.71
SCNpilot_cont_300_bf_scaffold_55135_curated
Species: Microbacterium ginsengisoli (100%)
1 1009 bp 65.21 1.00 99.90
SCNpilot_cont_300_bf_scaffold_12852_curated
Genus: Microbacterium (100%)
5 6044 bp 70.58 1.00 97.93
SCNpilot_cont_300_bf_scaffold_5963_curated
Species: Microbacterium mangrovi (60%)
5 4337 bp 69.59 1.00 96.22
SCNpilot_cont_300_bf_scaffold_42637_curated
Species: Microbacterium ginsengisoli (100%)
1 1304 bp 71.40 1.00 99.85
SCNpilot_cont_300_bf_scaffold_44948_curated
Genus: Microbacterium (66.67%)
3 2574 bp 72.03 1.00 98.37
SCNpilot_cont_300_bf_scaffold_6858_curated
Genus: Microbacterium (80%)
5 6618 bp 69.98 1.00 88.80
SCNpilot_cont_300_bf_scaffold_21680_curated
Genus: Microbacterium (66.67%)
3 3582 bp 66.22 1.00 71.27
SCNpilot_cont_300_bf_scaffold_12314_curated
Genus: Microbacterium (123.08%)
16 18290 bp 71.17 1.00 90.92
SCNpilot_cont_300_bf_scaffold_44861_curated
Species: Microbacterium azadirachtae (66.67%)
3 2821 bp 68.77 1.00 94.54
SCNpilot_cont_300_bf_scaffold_57402_curated
Species: Leucobacter sp. UCD-THU (50%)
2 1036 bp 71.04 1.00 95.85
SCNpilot_cont_300_bf_scaffold_26110_curated
Species: Microbacterium testaceum (50%)
2 1845 bp 70.35 1.00 100.16
SCNpilot_cont_300_bf_scaffold_55293_curated
Species: Microbacterium mangrovi (100%)
1 1066 bp 74.20 1.00 97.94
SCNpilot_cont_300_bf_scaffold_29027_curated
Species: Microbacterium ginsengisoli (50%)
2 2671 bp 70.46 1.00 94.35
SCNpilot_cont_300_bf_scaffold_22020_curated
Species: Microbacterium ginsengisoli (50%)
2 2062 bp 69.54 1.00 89.19
SCNpilot_cont_300_bf_scaffold_2343_curated
Class: Actinobacteria (55.56%)
9 8100 bp 68.30 1.00 85.63
SCNpilot_cont_300_bf_scaffold_30316_curated
Genus: Microbacterium (75%)
4 2776 bp 71.47 1.00 96.72
SCNpilot_cont_300_bf_scaffold_17655_curated
Genus: Microbacterium (100%)
4 2289 bp 68.02 1.00 87.16
SCNpilot_cont_300_bf_scaffold_30315_curated
Genus: Microbacterium (66.67%)
3 3968 bp 69.78 1.00 97.61
SCNpilot_cont_300_bf_scaffold_54801_curated
Genus: Microbacterium (66.67%)
3 1082 bp 71.63 1.00 90.67
SCNpilot_cont_300_bf_scaffold_5256_curated
Genus: Microbacterium (85.71%)
7 6651 bp 73.67 1.00 98.87
SCNpilot_cont_300_bf_scaffold_14503_curated
Species: Arthrobacter sp. Rue61a (66.67%)
3 3216 bp 71.89 1.00 93.84
SCNpilot_cont_300_bf_scaffold_27850_curated
Species: Microbacterium sp. C448 (66.67%)
3 1776 bp 75.79 1.00 95.78
SCNpilot_cont_300_bf_scaffold_674_curated
Genus: Microbacterium (54.55%)
33 32975 bp 70.50 1.00 95.33
SCNpilot_cont_300_bf_scaffold_11296_curated
Genus: Microbacterium (62.5%)
8 6945 bp 72.74 1.00 94.99
SCNpilot_cont_300_bf_scaffold_54116_curated
Species: Microbacterium sp. C448 (50%)
2 1077 bp 68.43 1.00 72.70
SCNpilot_cont_300_bf_scaffold_1392_curated
Order: Micrococcales (52.63%)
21 18653 bp 69.61 1.00 92.66
SCNpilot_cont_300_bf_scaffold_2435_curated
Genus: Microbacterium (88.89%)
9 8119 bp 71.03 1.00 92.97
SCNpilot_cont_300_bf_scaffold_6369_curated
Genus: Microbacterium (84.62%)
13 14915 bp 69.76 1.00 94.76
SCNpilot_cont_300_bf_scaffold_35462_curated
Genus: Microbacterium (100%)
3 1500 bp 75.13 1.00 97.80
SCNpilot_cont_300_bf_scaffold_13081_curated
Species: BJP_08E140C01_10KDA_Microbacterium_68_10 (50%)
2 2768 bp 72.51 1.00 86.38
SCNpilot_cont_300_bf_scaffold_20409_curated
Genus: Microbacterium (100%)
3 2146 bp 70.08 1.00 90.03
SCNpilot_cont_300_bf_scaffold_2369_curated
Genus: Microbacterium (57.14%)
7 8306 bp 68.83 1.00 92.17
SCNpilot_cont_300_bf_scaffold_46549_curated
Species: Microbacterium mangrovi (100%)
2 1206 bp 69.98 1.00 100.00
SCNpilot_cont_300_bf_scaffold_11956_curated
Species: Microbacterium ginsengisoli (66.67%)
4 5120 bp 72.60 1.00 85.66
SCNpilot_cont_300_bf_scaffold_64606_curated
Species: Microbacterium sp. MRS-1 (50%)
2 1558 bp 72.79 1.00 98.78
SCNpilot_cont_300_bf_scaffold_33270_curated
Genus: Microbacterium (66.67%)
3 1580 bp 71.20 1.00 101.77
SCNpilot_cont_300_bf_scaffold_27686_curated
Species: Microbacterium sp. oral taxon 186 (100%)
1 2413 bp 71.78 1.00 90.01
SCNpilot_cont_300_bf_scaffold_33479_curated
Genus: Microbacterium (100%)
5 3882 bp 70.14 1.00 95.13
SCNpilot_cont_300_bf_scaffold_24923_curated
Species: Microbacterium sp. C448 (100%)
2 1890 bp 68.47 1.00 98.10
SCNpilot_cont_300_bf_scaffold_48046_curated
Species: Microbacterium sp. TS-1 (50%)
2 1227 bp 66.83 1.00 89.49
Displaying items 501-550 of 598 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.