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SCNpilot_cont_300_bf_scaffold_5389_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5389_curated_1
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..191
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SP53_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05938.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_5389_curated_2
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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342..827
DNA (486bp) protein (162aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Malallergen n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTU9_9BRAD
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Malallergen {ECO:0000313|EMBL:EAQ36658.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
SCNpilot_cont_300_bf_scaffold_5389_curated_3
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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978..1256
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z2Q3_9BRAD
conserved membrane hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM87032.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_300_bf_scaffold_5389_curated_4
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1267..1722)
DNA (456bp) protein (152aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
rnhA; ribonuclease H; K03469 ribonuclease HI [EC:3.1.26.4]
Ribonuclease H n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTU4_9BRAD
SCNpilot_cont_300_bf_scaffold_5389_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1719..2699)
DNA (981bp) protein (327aa)
homoserine kinase (EC:2.7.1.39); K02204 homoserine kinase type II [EC:2.7.1.39]
Homoserine kinase {ECO:0000255|HAMAP-Rule:MF_00301}; Short=HK {ECO:0000255|HAMAP-Rule:MF_00301};; Short=HSK {ECO:0000255|HAMAP-Rule:MF_00301};; EC=2.7.1.39 {ECO:0000255|HAMAP-Rule:MF_00301};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Homoserine kinase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=KHSE_NITHX rbh
SCNpilot_cont_300_bf_scaffold_5389_curated_6
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2733..3695)
DNA (963bp) protein (321aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2]
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTU2_9BRAD
SCNpilot_cont_300_bf_scaffold_5389_curated_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3930..4631
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH27_NITHX
hypothetical protein; K09987 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64470.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_5389_curated_8
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4816..5073)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH26_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64471.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_5389_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5151..7073)
DNA (1923bp) protein (641aa)
Propionyl-CoA synthetase {ECO:0000313|EMBL:ABE64472.1}; EC=6.2.1.17 {ECO:0000313|EMBL:ABE64472.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
AMP-dependent synthetase and ligase; K01908 propionyl-CoA synthetase [EC:6.2.1.17]
Propionyl-CoA synthetase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QH25_NITHX
SCNpilot_cont_300_bf_scaffold_5389_curated_10

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comp(7070..7324)
DNA (255bp) protein (85aa)
cbbL; ribulose bisphosphate carboxylase large chain 2 (RuBisCO large subunit 2); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment) n=1 Tax=uncultured bacterium RepID=F1BZN4_9BACT
RubisCO protein {ECO:0000313|EMBL:CDN72200.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_5389_curated_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7807..8526)
DNA (720bp) protein (240aa)
fructose-1,6-bisphosphate aldolase (EC:4.1.2.13); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTT8_9BRAD
Fructose-bisphosphate aldolase, class II, Calvin cycle subtype {ECO:0000313|EMBL:EAQ36667.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
Displaying 11 items

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