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SCNpilot_cont_300_bf_scaffold_620_curated

Search features with annotation key words

Displaying items 1-30 of 93 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_620_curated_1
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(76..1191)
DNA (1116bp) protein (372aa)
UPI0003CFFAD6 related cluster n=3 Tax=unknown RepID=UPI0003CFFAD6
Transposase IS110 {ECO:0000313|EMBL:ESZ65327.1}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
transposase of ISMex29, IS110 family
SCNpilot_cont_300_bf_scaffold_620_curated_2
unknown

Not on your lists

1291..1614
DNA (324bp) protein (108aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_620_curated_3
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1624..1983)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D3T4_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL09566.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_300_bf_scaffold_620_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2570..5770)
DNA (3201bp) protein (1067aa)
UPF0753 protein Nham_4329 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Y4329_NITHX
UPF0753 protein Nham_4329 {ECO:0000255|HAMAP-Rule:MF_01871}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
hypothetical protein; K09822 hypothetical protein
SCNpilot_cont_300_bf_scaffold_620_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6167..7255)
DNA (1089bp) protein (363aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q219W9_RHOPB
hypothetical protein
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:ABD86817.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_620_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8324..8623
DNA (300bp) protein (100aa)
Transcriptional regulator, Fis family n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8Y7_9BRAD
Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CEG08978.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_620_curated_7
unknown

Not on your lists

8691..8837
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_620_curated_8
unknown

Not on your lists

comp(8938..9081)
DNA (144bp) protein (48aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A553_STAND
SCNpilot_cont_300_bf_scaffold_620_curated_9
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9170..9475)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WU60_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36481.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_620_curated_10
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9609..9854)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WW99_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35741.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_620_curated_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10227..11852
DNA (1626bp) protein (542aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WU54_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ36485.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
peptidoglycan binding domain-containing protein
SCNpilot_cont_300_bf_scaffold_620_curated_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12126..12374
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGW9_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64528.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_620_curated_13
unknown

Not on your lists

comp(12272..12859)
DNA (588bp) protein (196aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_620_curated_14
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13752..15212
DNA (1461bp) protein (487aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG08_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64839.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_620_curated_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15167..16435
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG09_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64838.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_620_curated_16
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16435..18414
DNA (1980bp) protein (660aa)
glycosyl transferase family protein; K00694 cellulose synthase (UDP-forming) [EC:2.4.1.12]
Glycosyl transferase, family 2 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG10_NITHX
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABE64837.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_620_curated_17
Bradyrhizobium sp. S23321, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18513..18698)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. S23321 RepID=I0G8B3_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL77000.1}; TaxID=335659 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. S23321.;"
SCNpilot_cont_300_bf_scaffold_620_curated_18
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19355..19849
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2S0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ33471.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_620_curated_19
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20671..20913
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QGU0_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64557.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_620_curated_20
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21120..21476
DNA (357bp) protein (119aa)
PRC-barrel protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3X2S2_9BRAD
PRC-barrel protein {ECO:0000313|EMBL:EAQ33467.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
PRC-barrel protein
SCNpilot_cont_300_bf_scaffold_620_curated_21
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21873..22697)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RWD9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD86266.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_620_curated_22
unknown

Not on your lists

23181..23384
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_620_curated_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23465..23647)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WZY3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ34454.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_620_curated_24
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23809..23985
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXR2_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35229.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_620_curated_25
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24530..25807)
DNA (1278bp) protein (426aa)
Phage uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXR6_9BRAD
Phage uncharacterized protein {ECO:0000313|EMBL:EAQ35225.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
terminase-like protein
SCNpilot_cont_300_bf_scaffold_620_curated_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25965..26261)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXR5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EAQ35224.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_620_curated_27
unknown

Not on your lists

comp(26303..26461)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_620_curated_28
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26458..27798)
DNA (1341bp) protein (447aa)
Prophage LambdaMc01, DNA methyltransferase n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WXR4_9BRAD
Prophage LambdaMc01, DNA methyltransferase {ECO:0000313|EMBL:EAQ35223.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
prophage LambdaMc01, DNA methyltransferase
SCNpilot_cont_300_bf_scaffold_620_curated_29
unknown

Not on your lists

27929..28183
DNA (255bp) protein (85aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_620_curated_30
unknown

Not on your lists

28135..28365
DNA (231bp) protein (77aa)

This feature has no annotations

Displaying items 1-30 of 93 in total

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