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SCNpilot_cont_300_bf_scaffold_1647_curated_7

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: 4978..6339

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter solute receptor, TAXI family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214W0_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 454.0
  • Bit_score: 656
  • Evalue 1.90e-185
TRAP transporter solute receptor TAXI family protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 454.0
  • Bit_score: 656
  • Evalue 6.10e-186
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:ABD88076.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 454.0
  • Bit_score: 656
  • Evalue 2.70e-185

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
GTGCGGCGCAAGTTTGCGCTTGTGCTGCTGGCTGGAGTTCTCGCCCTGACCGGCGCGGTCGCAGGCATCTACTATTACACCATGCGTCCGGTGATGCTGCAGGTCGCCGTCGGCCCGGCGAACAGCGACGACGCGAAGGTCGTTCAGGGACTGGCGCAGGCCTTTGCGCGCTCCCACCAGCAAATCCGCCTGCACCCGCTGCTGACCGATGGAGTGGCCGCGAGCGCCTCCGCATTGTCGAACGGCGAGGCCGATCTCGCGATCGTCCGCGGCGACCTCGACGTTCCGAAGAATGCACAAGCGGTCGCGACGTTGCGCAAGAGCGTCGCGGTTTTGTGGGTTCCGCCGAAACCGAAGGGCAAAAATGCCAAGGCCGCGACAATCAAGACTATCGCGCAACTGGCCGGCCGTCGCGTCGGCGTCGTCGGCCAGACCGACGCCAATGTGAACTTGCTGAAAGTCATCCTGCAGCAATACAACATCGATCCCGCCAAGATGGACATCGTCCGGTTCGCCACCACCGAAGTCGCCCAGGCGATCCGCGCCCAGAAGGCGGACGCATTCCTCGCCGCAGGTCCCGTCAACAGCAAGATCACCGCGGATGCCATTGCGGCCTCCGCACGCGACGGCGGCGCGCCGACCTTCCTCGCGATCGATTCCGCCGACGCGATCGCGCAAAATCATCCGGTGTACGAAGCCGCGGAAATTCCGCCGGGCGCGTTCGGCGGTTCCCCCGCCCGTCCCGACGAAGAGGTGAAAACCATCAGCTTCTCGCATCACATCGTCGCGCGAAAAAGCCTGTCGGATACGACGGTCGCCGCATTCACCCGGCAGCTCTTCGCGATCCGGCAACAGGTCATATCGGACTTCCCGCTGGCCGCTAAAATCGAAACGCCCGATACCGACAAGGACGCCGTGATACCGGTTCACCCGGGTGCCGCCGCCTACGTCGACGGTGAAGAGAAAACCTTCCTCGATCGCTACAGCGATTACATCTGGTGGGCGCTGATGGCGATGTCGGCGACGGGGTCCGTGGGCGCCTGGTTCGCGAGCCACCTGAAAAAGGAGGAGCGGGTCGGCAACGTGACCCAGCGCGACCGGCTGCTCGACATGATCGCGCTGGCGCGCCGGAGCGATTCCGCCGATGACCTCGACCAGATGCAGGCCGAAGCCGATGCCATCCTGCGCGATACGTTGAACCGCTTCGAGAGCGGCGCGATCGAGGAAGGGTCGCTAACCTCCTTCAACATTGCGCTCGAGCAGTTCCATAACGCGGTGGCGGACCGCAAATGGCTGCTGATGAGCACGCCGCCGCGCCCGCAAACCGCGAGCGTTCAGCTCCGGACGACGACCGGGTCATAA
PROTEIN sequence
Length: 454
VRRKFALVLLAGVLALTGAVAGIYYYTMRPVMLQVAVGPANSDDAKVVQGLAQAFARSHQQIRLHPLLTDGVAASASALSNGEADLAIVRGDLDVPKNAQAVATLRKSVAVLWVPPKPKGKNAKAATIKTIAQLAGRRVGVVGQTDANVNLLKVILQQYNIDPAKMDIVRFATTEVAQAIRAQKADAFLAAGPVNSKITADAIAASARDGGAPTFLAIDSADAIAQNHPVYEAAEIPPGAFGGSPARPDEEVKTISFSHHIVARKSLSDTTVAAFTRQLFAIRQQVISDFPLAAKIETPDTDKDAVIPVHPGAAAYVDGEEKTFLDRYSDYIWWALMAMSATGSVGAWFASHLKKEERVGNVTQRDRLLDMIALARRSDSADDLDQMQAEADAILRDTLNRFESGAIEEGSLTSFNIALEQFHNAVADRKWLLMSTPPRPQTASVQLRTTTGS*