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SCNpilot_cont_300_bf_scaffold_1647_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1647_curated_1
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(85..873)
DNA (789bp) protein (263aa)
Phosphoesterase, PA-phosphatase related n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTF6_9BRAD
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related {ECO:0000313|EMBL:EAQ36801.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
SCNpilot_cont_300_bf_scaffold_1647_curated_2
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1022..1498)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHE4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64353.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_3
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1654..2940)
DNA (1287bp) protein (429aa)
hypothetical protein; K06941 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Dual-specificity RNA methyltransferase RlmN {ECO:0000255|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000255|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000255|HAMAP-Rule:MF_01849}; TaxID=3
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=RLMN_NITHX rbh
SCNpilot_cont_300_bf_scaffold_1647_curated_4
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3061..3609)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHE2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64355.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3971..4351)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHE1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64356.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_6
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4448..4753)
DNA (306bp) protein (102aa)
phhB; pterin-4-alpha-carbinolamine dehydratase (EC:4.2.1.96); K01724 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
Putative pterin-4-alpha-carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PHS {ECO:0000255|HAMAP-Rule:MF_00434};; EC=4.2.1.96 {ECO:0000255|HAMAP-Rule:MF_00434};; 4-alpha-hydroxy-tetrahydropterin dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Pterin carbinolamine dehydratase {ECO:0000255|HAMAP-Rule:MF_00434}; Short=PCD {ECO:0000255|HAMAP-Rule:MF_00434};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
Putative pterin-4-alpha-carbinolamine dehydratase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PHS_NITHX
SCNpilot_cont_300_bf_scaffold_1647_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4978..6339
DNA (1362bp) protein (454aa)
TRAP transporter solute receptor, TAXI family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q214W0_RHOPB
TRAP transporter solute receptor TAXI family protein
TRAP transporter solute receptor, TAXI family {ECO:0000313|EMBL:ABD88076.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_8
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6687..7025
DNA (339bp) protein (113aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SNS8_NITWN
4Fe-4S ferredoxin; K05524 ferredoxin
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:ABA06063.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7210..7602
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHD8_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64359.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_10
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7849..9750)
DNA (1902bp) protein (634aa)
Chaperone protein HtpG n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=HTPG_NITHX rbh
heat shock protein 90; K04079 molecular chaperone HtpG
Chaperone protein HtpG {ECO:0000255|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000255|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000255|HAMAP-Rule:MF_00505}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_11
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10124..10786
DNA (663bp) protein (221aa)
PepSY-associated TM helix protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTE2_9BRAD
PepSY-associated TM helix protein {ECO:0000313|EMBL:EAQ36812.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
PepSY-associated TM helix family protein; K09939 hypothetical protein
SCNpilot_cont_300_bf_scaffold_1647_curated_12
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10797..11309
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WTE3_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA06067.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1647_curated_13
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11374..12021
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHD4_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE64363.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 13 items

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