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SCNpilot_cont_300_bf_scaffold_2011_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2011_curated_1
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(62..493)
DNA (432bp) protein (144aa)
Resolvase n=1 Tax=Sphingobium indicum B90A RepID=I5BD04_9SPHN
resolvase
Resolvase {ECO:0000313|EMBL:BAK68635.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
SCNpilot_cont_300_bf_scaffold_2011_curated_2
Sphingomonas sp. NS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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619..3510
DNA (2892bp) protein (964aa)
Tn3 family transposase for insertion sequence element n=2 Tax=Alphaproteobacteria RepID=I5BD03_9SPHN
Transposase Tn3 {ECO:0000313|EMBL:AJW29321.1}; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
transposase Tn3 family protein
SCNpilot_cont_300_bf_scaffold_2011_curated_3
Sphingopyxis alaskensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4117..4542)
DNA (426bp) protein (142aa)
Transcriptional regulator, MerR family n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GQ08_SPHAL
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABF54264.1}; TaxID=317655 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256); (Sphingomonas alaskensis).;"
SCNpilot_cont_300_bf_scaffold_2011_curated_4
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4618..6591
DNA (1974bp) protein (658aa)
Iron permease n=1 Tax=Sphingobium baderi LL03 RepID=T0I7D6_9SPHN
Iron permease {ECO:0000313|EMBL:EQB05549.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
iron permease; K07243 high-affinity iron transporter
SCNpilot_cont_300_bf_scaffold_2011_curated_5
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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6604..8784
DNA (2181bp) protein (727aa)
ATPase, E1-E2 type:heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:heavy metal translocating P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]
ATPase, E1-E2 type:Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DT7_DECAR
ATPase, E1-E2 type:Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:AAZ46994.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromatica (strain RCB).;"
SCNpilot_cont_300_bf_scaffold_2011_curated_6
unknown

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8781..9179
DNA (399bp) protein (133aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2011_curated_7
unknown

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9239..9436
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 7 items

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