name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_300_bf_scaffold_827_curated_1
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18..1301)
|
integrase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4AB11
Integrase {ECO:0000313|EMBL:EQB16282.1}; Flags: Fragment;; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
putative integrase
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_2
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1631..2167)
|
adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7]
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
Adenine phosphoribosyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IFN5_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_3
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2279..3115)
|
Cytochrome C n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H7V8_9SPHN
Cytochrome C {ECO:0000313|EMBL:EQB08188.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
cytochrome c1; K00413 ubiquinol-cytochrome c reductase cytochrome c1 subunit
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_4
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3139..4425)
|
Cytochrome b n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAJ9_NOVAD
cytochrome b/b6-like; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4436..4999)
|
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAJ8_NOVAD
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_6
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5218..5973)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000370FE6F
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein; K05810 conserved hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_7
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5966..8581)
|
Aminopeptidase N n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C5N0_9SPHN
Aminopeptidase N {ECO:0000313|EMBL:EIZ79142.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_8
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8644..9435
|
Epimerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0H7V2_9SPHN
Epimerase {ECO:0000313|EMBL:EQB08183.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
NAD-dependent epimerase/dehydratase
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_9
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9707..10654)
|
Amino acid lyase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GW22_9SPHN
Amino acid lyase {ECO:0000313|EMBL:EQB08181.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_10
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10828..11826
|
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:GAO54931.1}; EC=4.2.1.46 {ECO:0000313|EMBL:GAO54931.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
NAD-dependent epimerase/dehydratase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6]
NAD-dependent epimerase/dehydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G3I7_NOVAD
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_11
unknown
|
Not on your lists |
comp(12732..12893)
|
This feature has no annotations |
|
SCNpilot_cont_300_bf_scaffold_827_curated_12
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13427..14032)
|
Cytochrome C n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I1S1_9SPHN
Cytochrome C {ECO:0000313|EMBL:EQB18273.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
cytochrome c; K08738 cytochrome c
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_13
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14252..15148
|
Prephenate dehydratase {ECO:0000313|EMBL:EJU09623.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EJU09623.1};; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
Prephenate dehydratase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VNL0_9SPHN
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_14
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15222..15845
|
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLF7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD49232.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_15
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15842..17056
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WFX7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ79108.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_16
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17053..18006
|
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-]
ATPase AAA_3 n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IH91_9SPHN
ATPase AAA_3 {ECO:0000313|EMBL:CCA91342.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_17
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18008..19354
|
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IH92_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA91343.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_18
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19351..20397
|
membrane protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B53E3A
Scaffold4, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32854.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20394..21284
|
RDD protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GB64_NOVAD
hypothetical protein
RDD protein {ECO:0000313|EMBL:ABD24909.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_20
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21281..21736
|
N-acetyltransferase GCN5; K03829 putative acetyltransferase [EC:2.3.1.-]
GCN5-related N-acetyltransferase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB46_9SPHN
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EHJ61513.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
|
|
SCNpilot_cont_300_bf_scaffold_827_curated_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21802..22926
|
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1]
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBA8_NOVAD
|