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SCNpilot_expt_1000_bf_scaffold_2244_curated

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2244_curated_1
unknown

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comp(29..382)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2244_curated_2
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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548..1138
DNA (591bp) protein (197aa)
dimethylglycine dehydrogenase (EC:1.5.99.2)
Putative oxidoreductase protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EWH8_9RHOB
Putative oxidoreductase protein {ECO:0000313|EMBL:CDX36428.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_expt_1000_bf_scaffold_2244_curated_3
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1141..3597
DNA (2457bp) protein (819aa)
Dimethylglycine dehydrogenase, mitochondrial {ECO:0000313|EMBL:CDX36425.1}; EC=1.5.8.4 {ECO:0000313|EMBL:CDX36425.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
Dimethylglycine dehydrogenase n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SQU1_9RHOB
dimethylglycine dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2244_curated_4
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3601..5175
DNA (1575bp) protein (525aa)
trimethylamine methyltransferase; K14083 trimethylamine methyltransferase [EC:2.1.1.-]
Uncharacterized protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EWH9_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDX36422.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_expt_1000_bf_scaffold_2244_curated_5
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5286..6251
DNA (966bp) protein (322aa)
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CV73_9RHOB
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein {ECO:0000313|EMBL:CDX36413.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
glycine betaine ABC transporter substrate binding protein; K02002 glycine betaine/proline transport system substrate-binding protein
SCNpilot_expt_1000_bf_scaffold_2244_curated_6
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6264..7355
DNA (1092bp) protein (364aa)
Glycine betaine/proline ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDX36416.1}; EC=3.6.3.32 {ECO:0000313|EMBL:CDX36416.1};; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
proV; glycine betaine/L-proline ABC transporter ATPase; K02000 glycine betaine/proline transport system ATP-binding protein [EC:3.6.3.32]
glycine/betaine ABC transporter n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002EBDF84
SCNpilot_expt_1000_bf_scaffold_2244_curated_7
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7352..8845
DNA (1494bp) protein (498aa)
Glycine betaine/proline ABC transporter, permease protein, putative n=1 Tax=Roseovarius sp. TM1035 RepID=A6E5Z2_9RHOB
Putative Glycine betaine/proline ABC transporter, permease protein {ECO:0000313|EMBL:CDX36419.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
putative glycine/L-proline transport system permease protein
SCNpilot_expt_1000_bf_scaffold_2244_curated_8
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9212..9820
DNA (609bp) protein (203aa)
Betaine aldehyde dehydrogenase 2, mitochondrial n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P4A9_RHIML
Betaine aldehyde dehydrogenase {ECO:0000313|EMBL:AHK47054.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
aldehyde dehydrogenase
SCNpilot_expt_1000_bf_scaffold_2244_curated_9
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9989..10363
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5C2R7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM76119.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
Cupin 2 conserved barrel domain-containing protein
SCNpilot_expt_1000_bf_scaffold_2244_curated_10
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10377..10730)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNB091 RepID=UPI0003713651
Uncharacterized protein {ECO:0000313|EMBL:AJF63903.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
SCNpilot_expt_1000_bf_scaffold_2244_curated_11
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11857..12696
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D3A39
Uncharacterized protein {ECO:0000313|EMBL:KFL29498.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_expt_1000_bf_scaffold_2244_curated_12
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12755..13774
DNA (1020bp) protein (340aa)
Basic membrane lipoprotein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A5E4_RHILW
Lipoprotein {ECO:0000313|EMBL:KGM31760.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins
SCNpilot_expt_1000_bf_scaffold_2244_curated_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13793..15298
DNA (1506bp) protein (502aa)
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC transporter, ATP-binding protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EY93_9ACTO
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM31759.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_expt_1000_bf_scaffold_2244_curated_14
unknown

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15295..15432
DNA (138bp) protein (46aa)

This feature has no annotations

Displaying 14 items

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