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SCNpilot_expt_1000_bf_scaffold_2415_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_2415_curated_1
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28..240)
DNA (213bp) protein (71aa)
XRE family transcriptional regulator n=1 Tax=Nitratireductor indicus C115 RepID=K2NZM9_9RHIZ
XRE family transcriptional regulator {ECO:0000313|EMBL:EKF40521.1}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
XRE family transcriptional regulator; K07727 putative transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_2415_curated_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(250..816)
DNA (567bp) protein (189aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VCL6_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU42721.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_expt_1000_bf_scaffold_2415_curated_3
unknown

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1182..1478
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2415_curated_4
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1871..2296
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI0003678F13
alpha/beta hydrolase
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
SCNpilot_expt_1000_bf_scaffold_2415_curated_5
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3787..3966
DNA (180bp) protein (60aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI0003614836
Uncharacterized protein {ECO:0000313|EMBL:EPE98498.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
radC; DNA repair protein RadC; K03630 DNA repair protein RadC
SCNpilot_expt_1000_bf_scaffold_2415_curated_6
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4077..5483
DNA (1407bp) protein (469aa)
soluble pyridine nucleotide transhydrogenase; K00322 NAD(P) transhydrogenase [EC:1.6.1.1]
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component n=1 Tax=Rhizobium sp. CF080 RepID=J3CVG7_9RHIZ
Soluble pyridine nucleotide transhydrogenase {ECO:0000313|EMBL:CDN53797.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_expt_1000_bf_scaffold_2415_curated_7
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5541..5912)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJF9_RHITR
Uncharacterized protein {ECO:0000313|EMBL:GAK70148.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
hypothetical protein
SCNpilot_expt_1000_bf_scaffold_2415_curated_8
Paracoccus denitrificans, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6655..7041)
DNA (387bp) protein (129aa)
DoxX family protein n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BAL7_PARDP
DoxX family protein; K15977 putative oxidoreductase
DoxX family protein {ECO:0000313|EMBL:ABL72561.1}; TaxID=318586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus denitrificans (strain Pd 1222).;"
SCNpilot_expt_1000_bf_scaffold_2415_curated_9
unknown

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7824..8300
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_2415_curated_10
Rhizobium sp., Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8394..9731)
DNA (1338bp) protein (446aa)
GTPase HflX n=1 Tax=Rhizobium sp. RepID=L0NGD2_RHISP
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=391 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp.;"
hflX; GTP-binding protein HflX
SCNpilot_expt_1000_bf_scaffold_2415_curated_11
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9808..10050)
DNA (243bp) protein (81aa)
hypothetical protein n=2 Tax=Rhizobium RepID=UPI000377D624
hfq; RNA-binding protein Hfq; K03666 host factor-I protein
RNA-binding protein Hfq {ECO:0000255|HAMAP-Rule:MF_00436}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_expt_1000_bf_scaffold_2415_curated_12
unknown

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comp(10231..10296)
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 12 items

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