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SCNpilot_expt_1000_bf_scaffold_1560_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_1560_curated_1
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1326
DNA (1326bp) protein (442aa)
FAD dependent oxidoreductase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
FAD dependent oxidoreductase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE60_NAKMY
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_1560_curated_2
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1357..2220
DNA (864bp) protein (288aa)
ketose-bisphosphate aldolase (EC:4.1.2.40); K01624 fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
Ketose-bisphosphate aldolase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE62_NAKMY
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_1560_curated_3
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2234..2908
DNA (675bp) protein (225aa)
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XE63_NAKMY
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_expt_1000_bf_scaffold_1560_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3100..4071
DNA (972bp) protein (324aa)
qor-1; quinone oxidoreductase 1 (EC:1.6.5.5)
Quinone oxidoreductase Qor n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXL0_9RHIZ
NADPH:quinone reductase {ECO:0000313|EMBL:EYR82824.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_1560_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4169..5968)
DNA (1800bp) protein (600aa)
Putative monooxygenase protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EX22_9RHIZ
Putative monooxygenase protein {ECO:0000313|EMBL:EYR83096.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative monooxygenase protein
SCNpilot_expt_1000_bf_scaffold_1560_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6035..7108)
DNA (1074bp) protein (358aa)
(R,R)-butanediol dehydrogenase BdhA {ECO:0000313|EMBL:EYR83097.1}; EC=1.1.1.4 {ECO:0000313|EMBL:EYR83097.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
zinc-binding dehydrogenase (EC:1.1.1.-)
(R,R)-butanediol dehydrogenase BdhA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFQ3_9RHIZ
SCNpilot_expt_1000_bf_scaffold_1560_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7271..9142)
DNA (1872bp) protein (624aa)
Acetoin catabolism regulatory protein AcoR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVR4_9RHIZ
Acetoin catabolism regulatory protein AcoR {ECO:0000313|EMBL:EYR83098.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acetoin catabolism regulatory protein
SCNpilot_expt_1000_bf_scaffold_1560_curated_8
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9867..12125)
DNA (2259bp) protein (753aa)
DEAD/DEAH box helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-]
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035C1666
DEAD/DEAH box helicase {ECO:0000313|EMBL:ESY89553.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
SCNpilot_expt_1000_bf_scaffold_1560_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12076..13398)
DNA (1323bp) protein (441aa)
ATP /GTP binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035EEEAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH89240.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_expt_1000_bf_scaffold_1560_curated_10
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13395..14219)
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037ACAA7
Uncharacterized protein {ECO:0000313|EMBL:ESY89555.1}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
peptidoglycan-binding protein
Displaying 10 items

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