name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4095_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(34..975)
|
Peptide ABC transporter permease n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C5J5_9RHIZ
Peptide ABC transporter permease {ECO:0000313|EMBL:EYR81669.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(957..2141)
|
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN50_9RHIZ
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:EYR81670.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
acyl-coenzyme A:6-aminopenicillanic-acid-acyltransferase
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2285..3208
|
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFA8_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR81671.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
bphR; GntR family transcriptional regulator
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3295..3798)
|
Uncharacterized protein n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2QG60_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR83864.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3902..4288)
|
Conserved hypothetical exported protein n=1 Tax=Rhizobium leguminosarum bv. viciae (strain 3841) RepID=Q1MES2_RHIL3
hypothetical protein
Conserved hypothetical exported protein {ECO:0000313|EMBL:CAK08553.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_6
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4584..5447
|
Pantothenate synthetase n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YIN6_PARAH
pantothenate synthetase
Pantothenate synthetase {ECO:0000313|EMBL:AGT11338.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_7
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5458..6036
|
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XUZ6_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11339.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_8
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6081..7019)
|
Uncharacterized protein n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y6Y5_PARAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11340.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_9
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7386..8330)
|
Transcriptional regulator, LysR family n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z1M1_PARAH
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGT11341.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_10
unknown
|
Not on your lists |
comp(8377..8760)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_11
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8962..9639)
|
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI00037A4679
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGT11343.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_12
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9651..10070)
|
endoribonuclease L-PSP superfamily protein (EC:1.4.3.4)
endoribonuclease n=1 Tax=Xanthobacteraceae RepID=UPI000371A4AE
Endoribonuclease L-PSP superfamily protein {ECO:0000313|EMBL:ADE38498.1}; TaxID=488538 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster; Candidatus Puniceispirillum.;" source="Puniceispirillum marinum (strain IMCC1322).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_13
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10161..11681)
|
Vinylacetyl-CoA delta-isomerase (EC:5.3.3.3); K00483 4-hydroxyphenylacetate-3-monooxygenase large chain [EC:1.14.14.9]
Probable 4-hydroxyphenylacetic hydroxylase n=1 Tax=alpha proteobacterium BAL199 RepID=A8TSP7_9PROT
Probable 4-hydroxyphenylacetic hydroxylase {ECO:0000313|EMBL:EDP64301.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_14
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11849..12256)
|
ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Z1M6_PARAH
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KGJ10610.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC-type branched-chain amino acid transport systems, periplasmic component
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_15
unknown
|
Not on your lists |
12469..12780
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_16
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13509..14120
|
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y1H9_PARAH
ABC transporter permease {ECO:0000313|EMBL:KGJ10611.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
branched-chain amino acid ABC-type transport system, permease component
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_17
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14124..15314
|
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5YIP6_PARAH
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KGJ10612.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
branched-chain amino acid ABC-type transport system, permease component
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_18
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15311..16102
|
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XV03_PARAH
ABC-type branched-chain amino acid transport systems, ATPase component
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:KGJ10613.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_19
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16095..16796
|
ABC-type branched-chain amino acid transport systems, ATPase component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5Y6Z9_PARAH
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGJ10614.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
ABC-type branched-chain amino acid transport systems, ATPase component
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_20
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16882..18306
|
aspA; aspartate ammonia-lyase; K01744 aspartate ammonia-lyase [EC:4.3.1.1]
Fumarate lyase n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A0Q2_RHILW
Fumarate lyase {ECO:0000313|EMBL:ACI58186.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_21
unknown
|
Not on your lists |
18460..18591
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_22
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18588..18779
|
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46S57_CUPPJ
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
|
|
SCNpilot_expt_1000_bf_scaffold_4095_curated_23
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18776..19267)
|
Electron transfer flavoprotein subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQS7_9RHIZ
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KJF70363.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
Electron transfer flavoprotein subunit alpha,mitochondrial Alpha-ETF; K03522 electron transfer flavoprotein alpha subunit
|