Consensus taxonomy: Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria
Contig (seq size) | Coding Density (%) | Species | Genus | Order | Class | Phylum | Domain |
---|---|---|---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_43377_curated
888 bp | 1.00 x | 51.35% |
Unknown |
Unknown |
Unknown |
Unknown |
Unknown |
Unknown |
|
SCNpilot_expt_1000_bf_scaffold_14377_curated
6193 bp | 1.00 x | 56.84% |
0.447118 |
Rhizobium legumin...
40.00%
|
Rhizobium
60.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_28612_curated
1522 bp | 1.00 x | 58.67% |
0.46912 |
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
unknown
66.67%
|
SCNpilot_expt_1000_bf_scaffold_33230_curated
5269 bp | 1.00 x | 57.18% |
0.511862 |
unknown
62.50%
|
unknown
62.50%
|
unknown
62.50%
|
unknown
62.50%
|
unknown
62.50%
|
unknown
62.50%
|
SCNpilot_expt_1000_bf_scaffold_27379_curated
6626 bp | 1.00 x | 58.84% |
0.521582 |
Nitratireductor i...
50.00%
|
Nitratireductor
50.00%
|
Rhizobiales
50.00%
|
Alphaproteobacteria
62.50%
|
Proteobacteria
62.50%
|
Bacteria
62.50%
|
SCNpilot_expt_1000_bf_scaffold_8115_curated
12547 bp | 1.00 x | 57.95% |
0.526261 |
unknown
25.00%
|
unknown
50.00%
|
unknown
33.33%
|
Alphaproteobacteria
41.67%
|
Proteobacteria
58.33%
|
Bacteria
58.33%
|
SCNpilot_expt_1000_bf_scaffold_11362_curated
5238 bp | 1.00 x | 57.90% |
0.536082 |
unknown
71.43%
|
unknown
71.43%
|
unknown
71.43%
|
unknown
71.43%
|
unknown
71.43%
|
unknown
71.43%
|
SCNpilot_expt_1000_bf_scaffold_42208_curated
1052 bp | 1.00 x | 55.61% |
0.547529 |
Agrobacterium tum...
100.00%
|
Agrobacterium
100.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_2415_curated
10296 bp | 1.00 x | 57.14% |
0.580128 |
unknown
27.27%
|
unknown
36.36%
|
Rhizobiales
63.64%
|
Alphaproteobacteria
72.73%
|
Proteobacteria
81.82%
|
Bacteria
81.82%
|
SCNpilot_expt_1000_bf_scaffold_6196_curated
6349 bp | 1.00 x | 57.84% |
0.598677 |
Shinella sp. DD12
80.00%
|
Shinella
80.00%
|
Rhizobiales
80.00%
|
Alphaproteobacteria
80.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
SCNpilot_expt_1000_bf_scaffold_2644_curated
9974 bp | 1.00 x | 55.76% |
0.613595 |
unknown
53.85%
|
unknown
53.85%
|
unknown
53.85%
|
unknown
53.85%
|
Proteobacteria
53.85%
|
Bacteria
53.85%
|
SCNpilot_expt_1000_bf_scaffold_38884_curated
1105 bp | 1.00 x | 52.49% |
0.61629 |
Sinorhizobium fredii
50.00%
|
Sinorhizobium
50.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_10208_curated
6698 bp | 1.00 x | 54.67% |
0.626605 |
Shinella sp. DD12
42.86%
|
Shinella
42.86%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_43269_curated
1019 bp | 1.00 x | 59.67% |
0.627085 |
Microcoleus vagin...
100.00%
|
Microcoleus
100.00%
|
Oscillatoriales
100.00%
|
Oscillatoriophyci...
100.00%
|
Cyanobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_10468_curated
3506 bp | 1.00 x | 55.19% |
0.629778 |
Rhizobium sp. PDO...
40.00%
|
Rhizobium
40.00%
|
Rhizobiales
80.00%
|
Alphaproteobacteria
80.00%
|
Proteobacteria
80.00%
|
Bacteria
80.00%
|
SCNpilot_expt_1000_bf_scaffold_23994_curated
2227 bp | 1.00 x | 56.17% |
0.635833 |
Sinorhizobium fredii
100.00%
|
Sinorhizobium
100.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_4749_curated
8451 bp | 1.00 x | 61.91% |
0.643237 |
unknown
30.00%
|
unknown
30.00%
|
Rhizobiales
60.00%
|
Alphaproteobacteria
70.00%
|
Proteobacteria
70.00%
|
Bacteria
70.00%
|
SCNpilot_expt_1000_bf_scaffold_11972_curated
10193 bp | 1.00 x | 61.09% |
0.648386 |
unknown
25.00%
|
unknown
33.33%
|
Rhizobiales
41.67%
|
Alphaproteobacteria
75.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
SCNpilot_expt_1000_bf_scaffold_4489_curated
10505 bp | 1.00 x | 57.14% |
0.657687 |
Rhizobium sp. CF142
33.33%
|
Rhizobium
50.00%
|
Rhizobiales
75.00%
|
Alphaproteobacteria
83.33%
|
Proteobacteria
83.33%
|
Bacteria
83.33%
|
SCNpilot_expt_1000_bf_scaffold_3821_curated
8109 bp | 1.00 x | 59.66% |
0.659267 |
Neorhizobium galegae
16.67%
|
Rhizobium
50.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_14624_curated
14768 bp | 1.00 x | 58.68% |
0.661633 |
Pseudomonas aerug...
10.00%
|
Pseudomonas
20.00%
|
Rhizobiales
50.00%
|
Alphaproteobacteria
65.00%
|
Proteobacteria
95.00%
|
Bacteria
95.00%
|
SCNpilot_expt_1000_bf_scaffold_7449_curated
9924 bp | 1.00 x | 53.26% |
0.67896 |
Agrobacterium tum...
22.22%
|
Agrobacterium
33.33%
|
Rhizobiales
77.78%
|
Alphaproteobacteria
77.78%
|
Proteobacteria
88.89%
|
Bacteria
88.89%
|
SCNpilot_expt_1000_bf_scaffold_18014_curated
4212 bp | 1.00 x | 57.29% |
0.689459 |
Ensifer adhaerens
40.00%
|
Ensifer
40.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_11782_curated
3694 bp | 1.00 x | 61.02% |
0.689496 |
Rhizobium sp. AP16
25.00%
|
Rhizobium
75.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_24246_curated
6663 bp | 1.00 x | 58.13% |
0.694282 |
Rhizobium sp.
28.57%
|
Rhizobium
71.43%
|
Rhizobiales
114.29%
|
Alphaproteobacteria
114.29%
|
Proteobacteria
114.29%
|
Bacteria
114.29%
|
SCNpilot_expt_1000_bf_scaffold_17742_curated
3383 bp | 1.00 x | 62.75% |
0.697901 |
Rhizobium freirei
33.33%
|
Rhizobium
33.33%
|
Rhizobiales
66.67%
|
Alphaproteobacteria
66.67%
|
Proteobacteria
83.33%
|
Bacteria
83.33%
|
SCNpilot_expt_1000_bf_scaffold_10200_curated
5570 bp | 1.00 x | 57.13% |
0.703411 |
Rhodospirillum ru...
25.00%
|
Rhizobium
25.00%
|
Rhizobiales
75.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_1345_curated
16835 bp | 1.00 x | 54.13% |
0.708346 |
unknown
11.11%
|
Rhizobium
16.67%
|
Rhizobiales
61.11%
|
Alphaproteobacteria
77.78%
|
Proteobacteria
77.78%
|
Bacteria
83.33%
|
SCNpilot_expt_1000_bf_scaffold_19924_curated
2050 bp | 1.00 x | 58.44% |
0.711219 |
Chelativorans sp....
33.33%
|
Chelativorans
33.33%
|
Rhizobiales
66.67%
|
Alphaproteobacteria
66.67%
|
Proteobacteria
66.67%
|
Bacteria
66.67%
|
SCNpilot_expt_1000_bf_scaffold_3956_curated
10880 bp | 1.00 x | 58.07% |
0.714706 |
Sphingopyxis sp. MC1
21.43%
|
unknown
28.57%
|
unknown
28.57%
|
Gammaproteobacteria
35.71%
|
Proteobacteria
71.43%
|
Bacteria
78.57%
|
SCNpilot_expt_1000_bf_scaffold_11995_curated
6116 bp | 1.00 x | 57.36% |
0.718116 |
Rhizobium legumin...
25.00%
|
Pseudomonas
50.00%
|
Pseudomonadales
50.00%
|
Gammaproteobacteria
50.00%
|
Proteobacteria
75.00%
|
Bacteria
75.00%
|
SCNpilot_expt_1000_bf_scaffold_1591_curated
14050 bp | 1.00 x | 55.79% |
0.719359 |
Sinorhizobium fredii
36.84%
|
Sinorhizobium
36.84%
|
Rhizobiales
73.68%
|
Alphaproteobacteria
89.47%
|
Proteobacteria
89.47%
|
Bacteria
89.47%
|
SCNpilot_expt_1000_bf_scaffold_2421_curated
10809 bp | 1.00 x | 62.13% |
0.724119 |
Sinorhizobium mel...
8.33%
|
Rhizobium
50.00%
|
Rhizobiales
91.67%
|
Alphaproteobacteria
91.67%
|
Proteobacteria
91.67%
|
Bacteria
91.67%
|
SCNpilot_expt_1000_bf_scaffold_13955_curated
9195 bp | 1.00 x | 59.41% |
0.728548 |
Rhizobium legumin...
18.18%
|
Rhizobium
45.45%
|
Rhizobiales
81.82%
|
Alphaproteobacteria
81.82%
|
Proteobacteria
90.91%
|
Bacteria
90.91%
|
SCNpilot_expt_1000_bf_scaffold_4865_curated
31334 bp | 1.00 x | 59.68% |
0.731378 |
Ensifer adhaerens
11.43%
|
Rhizobium
48.57%
|
Rhizobiales
80.00%
|
Alphaproteobacteria
88.57%
|
Proteobacteria
91.43%
|
Bacteria
94.29%
|
SCNpilot_expt_1000_bf_scaffold_17107_curated
4748 bp | 1.00 x | 63.98% |
0.73294 |
Rhizobium freirei
25.00%
|
Rhizobium
37.50%
|
Rhizobiales
62.50%
|
Alphaproteobacteria
62.50%
|
Proteobacteria
62.50%
|
Bacteria
87.50%
|
SCNpilot_expt_1000_bf_scaffold_9855_curated
6580 bp | 1.00 x | 57.42% |
0.740426 |
Shinella sp. DD12
66.67%
|
Shinella
66.67%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_13646_curated
10522 bp | 1.00 x | 57.91% |
0.742444 |
Shinella sp. DD12
33.33%
|
Shinella
33.33%
|
Rhizobiales
50.00%
|
Alphaproteobacteria
83.33%
|
Proteobacteria
83.33%
|
Bacteria
83.33%
|
SCNpilot_expt_1000_bf_scaffold_4310_curated
8491 bp | 1.00 x | 59.10% |
0.742669 |
Bradyrhizobium el...
80.00%
|
Bradyrhizobium
80.00%
|
Rhizobiales
80.00%
|
Alphaproteobacteria
90.00%
|
Proteobacteria
90.00%
|
Bacteria
90.00%
|
SCNpilot_expt_1000_bf_scaffold_6703_curated
6333 bp | 1.00 x | 60.95% |
0.745144 |
Labrenzia aggregata
28.57%
|
Rhizobium
28.57%
|
Rhizobiales
57.14%
|
Alphaproteobacteria
85.71%
|
Proteobacteria
85.71%
|
Bacteria
85.71%
|
SCNpilot_expt_1000_bf_scaffold_9086_curated
7788 bp | 1.00 x | 61.13% |
0.745763 |
Bradyrhizobium el...
66.67%
|
Bradyrhizobium
66.67%
|
Rhizobiales
88.89%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_6970_curated
15456 bp | 1.00 x | 58.08% |
0.746506 |
Rhizobium legumin...
60.00%
|
Rhizobium
60.00%
|
Rhizobiales
86.67%
|
Alphaproteobacteria
93.33%
|
Proteobacteria
93.33%
|
Bacteria
93.33%
|
SCNpilot_expt_1000_bf_scaffold_8158_curated
7499 bp | 1.00 x | 60.90% |
0.7485 |
Shinella sp. DD12
57.14%
|
Shinella
57.14%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_8208_curated
15488 bp | 1.00 x | 60.09% |
0.749225 |
Rhizobium sp. PDO...
23.08%
|
Rhizobium
53.85%
|
Rhizobiales
92.31%
|
Alphaproteobacteria
92.31%
|
Proteobacteria
92.31%
|
Bacteria
92.31%
|
SCNpilot_expt_1000_bf_scaffold_2175_curated
18745 bp | 1.00 x | 59.80% |
0.75044 |
Enterobacter sp. ...
33.33%
|
Enterobacter
52.38%
|
Enterobacteriales
52.38%
|
Gammaproteobacteria
76.19%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_10711_curated
3459 bp | 1.00 x | 60.02% |
0.75889 |
Rhizobium sp. CF142
25.00%
|
Rhizobium
100.00%
|
Rhizobiales
100.00%
|
Alphaproteobacteria
100.00%
|
Proteobacteria
100.00%
|
Bacteria
100.00%
|
SCNpilot_expt_1000_bf_scaffold_2412_curated
40472 bp | 1.00 x | 61.99% |
0.75934 |
Shinella sp. DD12
18.37%
|
Rhizobium
18.37%
|
Rhizobiales
73.47%
|
Alphaproteobacteria
77.55%
|
Proteobacteria
79.59%
|
Bacteria
81.63%
|
SCNpilot_expt_1000_bf_scaffold_1429_curated
27731 bp | 1.00 x | 60.00% |
0.759872 |
Shinella sp. DD12
11.54%
|
Rhizobium
50.00%
|
Rhizobiales
96.15%
|
Alphaproteobacteria
96.15%
|
Proteobacteria
96.15%
|
Bacteria
96.15%
|
SCNpilot_expt_1000_bf_scaffold_3351_curated
10167 bp | 1.00 x | 59.25% |
0.760401 |
Ensifer adhaerens
18.18%
|
Rhizobium
63.64%
|
Rhizobiales
90.91%
|
Alphaproteobacteria
90.91%
|
Proteobacteria
90.91%
|
Bacteria
90.91%
|
SCNpilot_expt_1000_bf_scaffold_2645_curated
27994 bp | 1.00 x | 58.94% |
0.760663 |
Shinella sp. DD12
43.75%
|
Shinella
43.75%
|
Rhizobiales
90.63%
|
Alphaproteobacteria
90.63%
|
Proteobacteria
93.75%
|
Bacteria
96.88%
|