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SCNpilot_cont_300_bf_scaffold_11339_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_11339_curated_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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3..467
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366F865
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ71351.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_11339_curated_2
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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464..793
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368A927
Head-tail adaptor protein {ECO:0000313|EMBL:KJF71124.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
phage head-tail adaptor
SCNpilot_cont_300_bf_scaffold_11339_curated_3
unknown

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793..1071
DNA (279bp) protein (93aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_11339_curated_4
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1068..1493
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368A529
Uncharacterized protein {ECO:0000313|EMBL:AHB49042.1}; TaxID=1029756 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_11339_curated_5

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1520..1933
DNA (414bp) protein (138aa)
tail protein n=1 Tax=Kaistia granuli RepID=UPI00037F5711
Uncharacterized protein {ECO:0000313|EMBL:KKN92003.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
phage major tail protein
SCNpilot_cont_300_bf_scaffold_11339_curated_6
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1936..2253
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003625D82
gene transfer agent (GTA) like protein
Uncharacterized protein {ECO:0000313|EMBL:CEG08463.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_300_bf_scaffold_11339_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2250..2438
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000382E0AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD87378.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_11339_curated_8
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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2461..3027
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367594D
Tail protein {ECO:0000313|EMBL:EZQ16839.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_11339_curated_9
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3038..3685
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003667A07
Uncharacterized protein {ECO:0000313|EMBL:EIZ83271.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_11339_curated_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3682..4569
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037152EC
phage protein
Uncharacterized protein {ECO:0000313|EMBL:ABS68399.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_11339_curated_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4793..5233
DNA (441bp) protein (147aa)
peptidase n=1 Tax=Kaistia granuli RepID=UPI000368566F
NLP/P60 family protein {ECO:0000313|EMBL:EJW10161.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
putative phage cell wall peptidase, NlpC/P60
SCNpilot_cont_300_bf_scaffold_11339_curated_12
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5233..5853
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000365E30C
gene transfer agent (GTA) orfg15, like protein
Gene transfer agent (GTA) orfg15, like protein {ECO:0000313|EMBL:ABE62248.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 12 items

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