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SCNpilot_cont_300_bf_scaffold_3178_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3178_curated_1
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..323)
DNA (321bp) protein (107aa)
NADH dehydrogenase (Quinone) {ECO:0000313|EMBL:ESR22757.1}; EC=1.6.99.5 {ECO:0000313|EMBL:ESR22757.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
monovalent cation/H+ antiporter subunit D (EC:1.6.5.3); K05568 multicomponent Na+:H+ antiporter subunit D
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361FBFC
SCNpilot_cont_300_bf_scaffold_3178_curated_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(320..703)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E6FFB
multisubunit sodium/proton antiporter subunit MrpC; K05567 multicomponent Na+:H+ antiporter subunit C
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3178_curated_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(700..1119)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00038242BA
putative monovalent cation/H+ antiporter subunit B; K05566 multicomponent Na+:H+ antiporter subunit B
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3178_curated_4
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1122..1676)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003764A9E
PH adaptation potassium efflux system protein B1 {ECO:0000313|EMBL:ESR22754.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
putative multicomponent Na+-H+ antiporter subunit A; K05566 multicomponent Na+:H+ antiporter subunit B
SCNpilot_cont_300_bf_scaffold_3178_curated_5
Oceanicaulis sp. HTCC2633, Oceanicaulis, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1673..2062)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035FE07D
Uncharacterized protein {ECO:0000313|EMBL:EAP89129.1}; TaxID=314254 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Oceanicaulis.;" source="Oceanicaulis sp. HTCC2633.;"
monovalent cation/proton antiporter subunit MnhG/PhaG
SCNpilot_cont_300_bf_scaffold_3178_curated_6
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2059..2334)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003808D27
multiple resistance and pH regulation protein F; K05570 multicomponent Na+:H+ antiporter subunit F
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
SCNpilot_cont_300_bf_scaffold_3178_curated_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2821..4440)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U7D6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN86178.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_300_bf_scaffold_3178_curated_8
unknown

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5092..5457
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D120F
SCNpilot_cont_300_bf_scaffold_3178_curated_9
Devosia epidermidihirudinis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5470..6153)
DNA (684bp) protein (228aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJV8_RHITR
Uncharacterized protein {ECO:0000313|EMBL:KKC35281.1}; TaxID=1293439 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia epidermidihirudinis.;"
HAD-superfamily hydrolase, subfamily IA, variant 1
SCNpilot_cont_300_bf_scaffold_3178_curated_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6233..6832)
DNA (600bp) protein (200aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
superoxide dismutase, Fe-Mn family (EC:1.15.1.1); K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1]
superoxide dismutase n=1 Tax=Kaistia granuli RepID=UPI00037CE433
SCNpilot_cont_300_bf_scaffold_3178_curated_11
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7127..7567
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A52C5
Cytochrome c class II {ECO:0000313|EMBL:EMG54959.1}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
cytochrome c class II
SCNpilot_cont_300_bf_scaffold_3178_curated_12
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7607..8494
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037796F3
Putative diheme cytochrome c-553 {ECO:0000313|EMBL:BAQ17947.1}; TaxID=1384459 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
cycG; diheme cytochrome c signal peptide protein
SCNpilot_cont_300_bf_scaffold_3178_curated_13
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8504..9082)
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037868B9
Methylobacterium aquaticum DNA, complete genome, strain: MA-22A {ECO:0000313|EMBL:BAQ45443.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
decarboxylase; K06966
SCNpilot_cont_300_bf_scaffold_3178_curated_14
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9079..10476)
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379D6A5
Uncharacterized protein {ECO:0000313|EMBL:KKB11065.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
dapE1; hypothetical protein
SCNpilot_cont_300_bf_scaffold_3178_curated_15
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10580..10840)
DNA (261bp) protein (87aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
UPI0003CE1268 related cluster n=1 Tax=unknown RepID=UPI0003CE1268
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3178_curated_16
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10989..11225)
DNA (237bp) protein (79aa)
Transcription factor n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CDD9_9RHIZ
Transcription factor {ECO:0000313|EMBL:EIZ81967.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
transcription factor
SCNpilot_cont_300_bf_scaffold_3178_curated_17
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11290..11478)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375BCA8
Uncharacterized protein {ECO:0000313|EMBL:ETR76046.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ATPase; K06915
Displaying 17 items

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