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SCNpilot_cont_300_bf_scaffold_7107_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7107_curated_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..320)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035FF862
hypothetical protein
Hypothetical conserved protein {ECO:0000313|EMBL:ADZ69627.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_7107_curated_2
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(652..864)
DNA (213bp) protein (71aa)
cold-shock protein n=1 Tax=Kaistia granuli RepID=UPI00037EEA1D
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family)
Cold-shock DNA-binding domain protein {ECO:0000313|EMBL:ADJ22679.1}; TaxID=582899 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB; 11706 / TK 0415).;"
SCNpilot_cont_300_bf_scaffold_7107_curated_3
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1286..2173
DNA (888bp) protein (296aa)
carboxymethylenebutenolidase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035E164F
Dienelactone hydrolase-like enzyme {ECO:0000313|EMBL:EJJ28247.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
dienelactone hydrolase-like enzyme
SCNpilot_cont_300_bf_scaffold_7107_curated_4
unknown

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2327..2476
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_7107_curated_5
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2523..3653)
DNA (1131bp) protein (377aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C225E
major facilitator superfamily protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADH88216.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_7107_curated_6
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3746..4528)
DNA (783bp) protein (261aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A196C
SCNpilot_cont_300_bf_scaffold_7107_curated_7
bacterium YEK0313, Bacteria

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4712..5494
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000367A8A7
Bacterial SH3 domain protein {ECO:0000313|EMBL:CEJ14140.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7107_curated_8
Deinococcus peraridilitoris, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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5610..6692
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377B8FB
oxidoreductase, LLM family
Putative oxidoreductase, LLM family {ECO:0000313|EMBL:AFZ67803.1}; TaxID=937777 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416; / KR-200).;"
SCNpilot_cont_300_bf_scaffold_7107_curated_9
Aureimonas altamirensis, Aureimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7548..7784
DNA (237bp) protein (79aa)
septum site-determining protein MinD n=1 Tax=Kaistia granuli RepID=UPI0003710E1D
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=370622 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aureimonas.;" source="Aureimonas altamirensis.;"
septum site-determining protein MinD; K03609 septum site-determining protein MinD
Displaying 9 items

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