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SCNpilot_cont_300_bf_scaffold_1311_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1311_curated_1
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..315
DNA (315bp) protein (105aa)
mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:ABS68778.1}; EC=2.7.7.22 {ECO:0000313|EMBL:ABS68778.1};; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IL85_XANP2
SCNpilot_cont_300_bf_scaffold_1311_curated_2
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(380..1249)
DNA (870bp) protein (290aa)
oxidoreductase n=1 Tax=Kaistia granuli RepID=UPI00035E657C
MmsB protein {ECO:0000313|EMBL:BAQ45648.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
NAD-binding 6-phosphogluconate dehydrogenase
SCNpilot_cont_300_bf_scaffold_1311_curated_3
unknown

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1424..1696
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1311_curated_4
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1705..2079
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Ochrobactrum intermedium M86 RepID=M5K3A5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ELT50251.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1311_curated_5
Saccharomonospora marina, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2086..2940)
DNA (855bp) protein (285aa)
Putative membrane protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X4T6_9PSEU
Putative membrane protein {ECO:0000313|EMBL:EHR52215.1}; TaxID=882083 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora marina XMU15.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1311_curated_6
unknown

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comp(3158..3409)
DNA (252bp) protein (84aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1311_curated_7
unknown

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comp(3467..3670)
DNA (204bp) protein (68aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000376BFB5
SCNpilot_cont_300_bf_scaffold_1311_curated_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3764..5812)
DNA (2049bp) protein (683aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5); K01284 peptidyl-dipeptidase Dcp [EC:3.4.15.5]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037BD3CC
Peptidase M3 {ECO:0000313|EMBL:KGM31912.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_300_bf_scaffold_1311_curated_9
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5952..6854
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A8812
Ribokinase {ECO:0000313|EMBL:KKB78279.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1311_curated_10
unknown

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comp(6864..7925)
DNA (1062bp) protein (354aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1311_curated_11
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7966..8961)
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003811F13
Inosine/uridine-preferring nucleoside hydrolase
DNA glucosyllase {ECO:0000313|EMBL:AFT88256.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
SCNpilot_cont_300_bf_scaffold_1311_curated_12
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9045..11249)
DNA (2205bp) protein (735aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
priA family helicase (Primosomal protein N', replication factor Y); K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037225E7
SCNpilot_cont_300_bf_scaffold_1311_curated_13
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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11437..13872
DNA (2436bp) protein (812aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366A19B
pbpC; penicillin-binding transpeptidase/transglycosylase
Putative penicillin-binding transpeptidase/transglycosylase protein {ECO:0000313|EMBL:ADZ68468.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_1311_curated_14
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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13968..14645
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036092A5
heat shock protein DnaJ domain protein
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:ACI59103.1}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
SCNpilot_cont_300_bf_scaffold_1311_curated_15
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14633..15370)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000365AA97
Uncharacterized protein {ECO:0000313|EMBL:KKB77765.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1311_curated_16
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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15620..16534
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003680B5C
hypothetical protein; K14160 protein ImuA
Uncharacterized protein {ECO:0000313|EMBL:BAF89904.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_1311_curated_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16500..17567
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003613CD2
nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein; K14161 protein ImuB
Nucleotidyltransferase/DNA polymerase involved in DNA repair-like protein {ECO:0000313|EMBL:ADH91663.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Displaying 17 items

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