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SCNpilot_cont_300_bf_scaffold_2815_curated

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2815_curated_1
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..659
DNA (657bp) protein (219aa)
peptidase S41 n=1 Tax=Hoeflea sp. 108 RepID=UPI00037E241F
Cytochrome-c oxidase FixO2 {ECO:0000313|EMBL:AHK44624.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II
SCNpilot_cont_300_bf_scaffold_2815_curated_2
unknown

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656..823
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2815_curated_3
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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813..1697
DNA (885bp) protein (295aa)
Cbb3-type cytochrome c oxidase subunit n=2 Tax=Agrobacterium RepID=A9CIY8_AGRT5
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
fixP; cytochrome-c oxidase, FixP chain; K00406 cytochrome c oxidase cbb3-type subunit III rbh
SCNpilot_cont_300_bf_scaffold_2815_curated_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1711..3270
DNA (1560bp) protein (520aa)
nitrogen fixation protein fixG n=1 Tax=Pseudaminobacter salicylatoxidans RepID=UPI00038136AE
Nitrogen fixation protein FixG {ECO:0000313|EMBL:EHH08982.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
fixG; Nitrogen fixation protein FixG
SCNpilot_cont_300_bf_scaffold_2815_curated_5

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3267..3761
DNA (495bp) protein (165aa)
FixH family protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MK50_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN69553.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
fixH; nitrogen fixation protein FixH
SCNpilot_cont_300_bf_scaffold_2815_curated_6

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3758..6049
DNA (2292bp) protein (764aa)
fixI1; nitrogen fixation protein FixI (EC:3.6.3.-)
Nitrogen fixation protein fixI n=1 Tax=Nitratireductor indicus C115 RepID=K2P1L2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKN69554.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SCNpilot_cont_300_bf_scaffold_2815_curated_7
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6046..6210
DNA (165bp) protein (55aa)
Cytochrome oxidase maturation protein cbb3-type n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SKM7_RHOPH
Cytochrome oxidase maturation protein cbb3-type
Cytochrome oxidase maturation protein cbb3-type {ECO:0000313|EMBL:CCG08542.1}; TaxID=1150469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
SCNpilot_cont_300_bf_scaffold_2815_curated_8
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6411..7139
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0D1_CALAS
Uncharacterized protein {ECO:0000313|EMBL:KGM32711.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2815_curated_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7383..7667
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361A02D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDX30743.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
SCNpilot_cont_300_bf_scaffold_2815_curated_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7744..8487)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8K5_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH90539.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_2815_curated_11
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8750..8968
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4F566_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS52077.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2815_curated_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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9220..10728
DNA (1509bp) protein (503aa)
Xylulose kinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2C1_CALAS
xylB; xylulose kinase
Tax=RBG_16_RIF_CHLX_72_14_curated
SCNpilot_cont_300_bf_scaffold_2815_curated_13
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10707..11024)
DNA (318bp) protein (106aa)
Xaa-Pro aminopeptidase n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI000363B534
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CDX36145.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2815_curated_14
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12082..13149)
DNA (1068bp) protein (356aa)
Spermidine/putrescine import ATP-binding protein potA n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EJK2_9RHIZ
Putrescine transporter subunit: ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDX36143.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
spermidine/putrescine import ATP-binding protein PotA-like
SCNpilot_cont_300_bf_scaffold_2815_curated_15
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13153..13533)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3H4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX36140.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
amidinotransferase
SCNpilot_cont_300_bf_scaffold_2815_curated_16
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13524..14192)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5F3H4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX36140.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
amidinotransferase
SCNpilot_cont_300_bf_scaffold_2815_curated_17
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14189..14935)
DNA (747bp) protein (249aa)
Putative ABC transporter, permease protein n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5EIR1_9RHIZ
Putative ABC transporter, permease protein {ECO:0000313|EMBL:CDX36137.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
binding-protein-dependent transporter inner membrane component family protein 59; K02053 putative spermidine/putrescine transport system permease protein
Displaying 17 items

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