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SCNpilot_cont_300_bf_scaffold_4377_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4377_curated_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..174)
DNA (174bp) protein (58aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Ribonucleoside-diphosphate reductase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QHA6_NITHX
SCNpilot_cont_300_bf_scaffold_4377_curated_2

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952..2778
DNA (1827bp) protein (609aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2DNP4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98926.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
SCNpilot_cont_300_bf_scaffold_4377_curated_3
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3228..4058
DNA (831bp) protein (277aa)
Pyrimidine ABC transporter, ATP-binding protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REP4_PELHB
pyrimidine ABC transporter ATP-binding protein
Pyrimidine ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AEQ50894.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_4377_curated_4
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4068..5120
DNA (1053bp) protein (351aa)
GGDEF domain protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REP5_PELHB
diguanylate cyclase
GGDEF domain protein {ECO:0000313|EMBL:AEQ50895.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_4377_curated_5
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5454..5987
DNA (534bp) protein (178aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REP6_PELHB
binding-protein-dependent transport system inner membrane protein; K15599 putative hydroxymethylpyrimidine transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEQ50896.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_4377_curated_6
unknown

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comp(6557..6706)
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4377_curated_7
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6864..7883
DNA (1020bp) protein (340aa)
Luciferase family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REP8_PELHB
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:AEQ50898.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_4377_curated_8
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7908..8429
DNA (522bp) protein (174aa)
Ureidoglycolate lyase {ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|SAAS:SAAS00181913};; TaxID=441620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
Uncharacterized protein n=1 Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZB20_METPB
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4377_curated_9
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8548..9528
DNA (981bp) protein (327aa)
Transcriptional regulator, LysR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REP9_PELHB
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEQ50899.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_4377_curated_10
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9662..11131
DNA (1470bp) protein (490aa)
Oxidoreductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REQ0_PELHB
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:AEQ50900.1}; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
SCNpilot_cont_300_bf_scaffold_4377_curated_11
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11138..12598)
DNA (1461bp) protein (487aa)
Amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KMJ9_MESAW
Amidase {ECO:0000313|EMBL:CDX40217.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
Displaying 11 items

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