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SCNpilot_cont_300_bf_scaffold_6550_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_6550_curated_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19..2550)
DNA (2532bp) protein (844aa)
Sensor kinase; K13587 two-component system, cell cycle sensor histidine kinase and response regulator CckA [EC:2.7.13.3]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003780A22
Sensor kinase {ECO:0000313|EMBL:ADZ69980.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_6550_curated_2
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2971..4212
DNA (1242bp) protein (414aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E9361
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ37460.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
SCNpilot_cont_300_bf_scaffold_6550_curated_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4257..4673)
DNA (417bp) protein (139aa)
RNA polymerase-binding transcription factor DksA n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A287_STAND
TraR/DksA family transcriptional regulator; K06204 DnaK suppressor protein
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_6550_curated_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5061..5510
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003660102
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07295.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_300_bf_scaffold_6550_curated_5
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5535..5912)
DNA (378bp) protein (126aa)
Flagellar FlbT n=1 Tax=Rhodovulum sp. PH10 RepID=J9DEC8_9RHOB
Flagellar FlbT {ECO:0000313|EMBL:EJW09646.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
flagellar FlbT family protein; K06601 flagellar protein FlbT
SCNpilot_cont_300_bf_scaffold_6550_curated_6
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6153..6671
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LF04_SYNFM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK16006.1}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
SCNpilot_cont_300_bf_scaffold_6550_curated_7
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6842..7390
DNA (549bp) protein (183aa)
phosphohistidine phosphatase, SixA; K08296 phosphohistidine phosphatase [EC:3.1.3.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C8383
Phosphohistidine Phosphatase, SixA {ECO:0000313|EMBL:EEA95521.1}; TaxID=439495 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. JE062.;"
SCNpilot_cont_300_bf_scaffold_6550_curated_8
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8050..8826
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363147D
Conserved protein with nucleoside triphosphate hydrolase domain {ECO:0000313|EMBL:EAV45358.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
nucleoside triphosphate hydrolase; K06918
SCNpilot_cont_300_bf_scaffold_6550_curated_9
Mesorhizobium sp. L103C119B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8823..9803
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367CE4F
UPF0283 membrane protein X727_20375 {ECO:0000256|HAMAP-Rule:MF_01085}; TaxID=1287085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C119B0.;"
Membrane protein; K08990 putative membrane protein
SCNpilot_cont_300_bf_scaffold_6550_curated_10
unknown

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comp(9956..10129)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003606195
SCNpilot_cont_300_bf_scaffold_6550_curated_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10289..11221
DNA (933bp) protein (311aa)
Transcriptional regulator, MarR family N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6NAZ9_RHOPA
MarR family transcriptional regulator rbh
Transcriptional regulator, MarR family N-acetyltransferase {ECO:0000313|EMBL:CAE26474.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
SCNpilot_cont_300_bf_scaffold_6550_curated_12
unknown

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11297..11602
DNA (306bp) protein (102aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_6550_curated_13
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11645..12691)
DNA (1047bp) protein (349aa)
Ferredoxin--NADP reductase {ECO:0000256|HAMAP-Rule:MF_01685}; Short=FNR {ECO:0000256|HAMAP-Rule:MF_01685};; Short=Fd-NADP(+) reductase {ECO:0000256|HAMAP-Rule:MF_01685};; EC=1.18.1.2 {ECO:0000256|HAMAP-Rule:MF_01685};; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
ferredoxin--NADP reductase n=1 Tax=Kaistia granuli RepID=UPI0003779617
thioredoxin reductase
Displaying 13 items

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