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SCNpilot_cont_300_bf_scaffold_2497_curated

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2497_curated_1
Ruegeria sp. ANG-R, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..719)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036FC593
binding-protein-dependent transport systems inner membrane component; K02025 multiple sugar transport system permease protein
Sugar ABC transporter permease {ECO:0000313|EMBL:KIC37071.1}; TaxID=1577903 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria sp. ANG-R.;"
SCNpilot_cont_300_bf_scaffold_2497_curated_2
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(901..2184)
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037FF89F
Maltose/maltodextrin ABC transporter, substrate bi nding periplasmic protein MalE {ECO:0000313|EMBL:CDP53395.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
putative ABC-type sugar transport system, periplasmic component
SCNpilot_cont_300_bf_scaffold_2497_curated_3
Mesorhizobium sp. LSHC412B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3142..3519)
DNA (378bp) protein (126aa)
UPI0003CF1282 related cluster n=1 Tax=unknown RepID=UPI0003CF1282
Uncharacterized protein {ECO:0000313|EMBL:ESX90168.1}; TaxID=1287285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC412B00.;"
SCNpilot_cont_300_bf_scaffold_2497_curated_4
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3661..4026
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000373A777
Amidohydrolase {ECO:0000313|EMBL:KKB77058.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein; K07046
SCNpilot_cont_300_bf_scaffold_2497_curated_5
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4051..4380
DNA (330bp) protein (110aa)
hypothetical protein; K03534 L-rhamnose mutarotase [EC:5.1.3.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B3148
Uncharacterized protein {ECO:0000313|EMBL:ESW87575.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_300_bf_scaffold_2497_curated_6
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4660..5736
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036AB0E4
Oxidoreductase, Gfo/Idh/MocA family {ECO:0000313|EMBL:CDP53844.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
oxidoreductase domain-containing protein
SCNpilot_cont_300_bf_scaffold_2497_curated_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6096..6677
DNA (582bp) protein (194aa)
amine oxidase n=1 Tax=Kaistia granuli RepID=UPI000361DBCD
MaoC domain-containing protein dehydratase
Amine oxidase {ECO:0000313|EMBL:ESW87562.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
SCNpilot_cont_300_bf_scaffold_2497_curated_8
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6683..7840
DNA (1158bp) protein (386aa)
acyl-CoA transferase n=1 Tax=Kaistia granuli RepID=UPI0003779B5B
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:CDX40902.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
L-carnitine dehydratase/bile acid-inducible protein F
SCNpilot_cont_300_bf_scaffold_2497_curated_9
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8130..9278
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036654C0
Uncharacterized protein {ECO:0000313|EMBL:CDX12321.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
family 1 extracellular solute-binding protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_2497_curated_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9314..10915)
DNA (1602bp) protein (534aa)
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-]
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Glycogen debranching enzyme GlgX n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A1M8_STAND
SCNpilot_cont_300_bf_scaffold_2497_curated_11
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10894..11316)
DNA (423bp) protein (141aa)
glycogen debranching protein GlgX; K02438 glycogen operon protein GlgX [EC:3.2.1.-]
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovorus glucosetrophus (strain SIP3-4).;"
glycogen-debranching protein n=1 Tax=Methylotenera RepID=UPI0003715D9B
SCNpilot_cont_300_bf_scaffold_2497_curated_12
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11651..12142
DNA (492bp) protein (164aa)
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1); K00688 starch phosphorylase [EC:2.4.1.1]
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035EA136
Displaying 12 items

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