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SCNpilot_cont_300_bf_scaffold_1936_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1936_curated_1
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..449)
DNA (447bp) protein (149aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB12911.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_300_bf_scaffold_1936_curated_2
unknown

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comp(443..796)
DNA (354bp) protein (118aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1936_curated_3
unknown

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comp(1156..1617)
DNA (462bp) protein (154aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1936_curated_4
unknown

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2166..2435
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1936_curated_5
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3120..3617
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C6583
RDD domain-containing protein {ECO:0000313|EMBL:EFO29486.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
RDD family protein
SCNpilot_cont_300_bf_scaffold_1936_curated_6
Mesorhizobium sp. LSHC426A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3697..4452
DNA (756bp) protein (252aa)
arginyltransferase (EC:2.3.2.8); K00685 arginine-tRNA-protein transferase [EC:2.3.2.8]
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=1287298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC426A00.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003721059
SCNpilot_cont_300_bf_scaffold_1936_curated_7
unknown

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comp(4462..5496)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P071_9BACT
SCNpilot_cont_300_bf_scaffold_1936_curated_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5553..7811)
DNA (2259bp) protein (753aa)
DNA topoisomerase 4 subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00936};; Topoisomerase IV subunit A {ECO:0000256|HAMAP-Rule:MF_00936}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
DNA topoisomerase IV subunit A; K02621 topoisomerase IV subunit A [EC:5.99.1.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D4E19
SCNpilot_cont_300_bf_scaffold_1936_curated_9
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7845..8603)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X341_RHIFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL50297.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_300_bf_scaffold_1936_curated_10
Hoeflea phototrophica, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8747..9658)
DNA (912bp) protein (304aa)
chitin deacetylase n=1 Tax=Kaistia granuli RepID=UPI00036D5C90
Putative urate catabolism protein {ECO:0000313|EMBL:EDQ32055.2}; TaxID=411684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea phototrophica DFL-43.;"
chitin deacetylase
SCNpilot_cont_300_bf_scaffold_1936_curated_11
unknown

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9880..10086
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363C1E3
SCNpilot_cont_300_bf_scaffold_1936_curated_12
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10092..10919)
DNA (828bp) protein (276aa)
CDP-diacylglycerol--serine O-phosphatidyltransferase; K00998 phosphatidylserine synthase [EC:2.7.8.8]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371E077
CDP-diacylglycerol--serine O-phosphatidyltransferase {ECO:0000313|EMBL:EJW10026.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
SCNpilot_cont_300_bf_scaffold_1936_curated_13
Phyllobacterium sp. YR531, Phyllobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10919..11527)
DNA (609bp) protein (203aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00664, ECO:0000256|SAAS:SAAS00093350};; TaxID=1144343 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Phyllobacterium.;" source="Phyllobacterium sp. YR531.;"
phosphatidylserine decarboxylase; K01613 phosphatidylserine decarboxylase [EC:4.1.1.65]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000378474D
Displaying 13 items

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