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SCNpilot_cont_300_bf_scaffold_2030_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2030_curated_1
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..454
DNA (453bp) protein (151aa)
UPI0003CF8B18 related cluster n=1 Tax=unknown RepID=UPI0003CF8B18
Uncharacterized protein {ECO:0000313|EMBL:CDX42703.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
G-D-S-L family lipolytic protein
SCNpilot_cont_300_bf_scaffold_2030_curated_2
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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556..1116
DNA (561bp) protein (187aa)
Putative threonine efflux protein-like protein n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X975_RHIFR
threonine efflux protein-like protein
Putative threonine efflux protein-like protein {ECO:0000313|EMBL:AFL52431.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_300_bf_scaffold_2030_curated_3
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1386..1808
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E9DD2
cysteine rich repeat-containing protein
Cysteine rich repeat protein {ECO:0000313|EMBL:ADH88733.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_2030_curated_4
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1843..2439
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003734F82
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADH88734.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_2030_curated_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2515..4965)
DNA (2451bp) protein (817aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IEH0_BEII9
Uncharacterized protein {ECO:0000313|EMBL:CDH47125.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_2030_curated_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5257..6570
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A4C6_RHIFH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE98060.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_300_bf_scaffold_2030_curated_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6586..7626)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036189F3
Uncharacterized protein {ECO:0000313|EMBL:KGM32366.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_2030_curated_8
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7893..8918
DNA (1026bp) protein (342aa)
pld3; pyridoxal4-dehydrogenase Pld (EC:1.1.1.107)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035CA57B
D-threo-aldose 1-dehydrogenase {ECO:0000313|EMBL:EWY42598.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_cont_300_bf_scaffold_2030_curated_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8988..11936)
DNA (2949bp) protein (983aa)
Outer membrane autotransporter barrel domain n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IHM7_XANP2
Outer membrane autotransporter barrel domain {ECO:0000313|EMBL:ABS67520.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
outer membrane autotransporter
SCNpilot_cont_300_bf_scaffold_2030_curated_10
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12299..13168)
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C5A61
Uncharacterized protein {ECO:0000313|EMBL:KGM32364.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Autoinducer 2-binding protein lsrB
Displaying 10 items

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