ggKbase home page

SCNpilot_cont_300_bf_scaffold_1946_curated

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1946_curated_1
unknown

Not on your lists

3..98
DNA (96bp) protein (32aa)
indolepyruvate ferredoxin subunit alpha n=1 Tax=Martelella mediterranea RepID=UPI000376D18B
SCNpilot_cont_300_bf_scaffold_1946_curated_2
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109..1665
DNA (1557bp) protein (519aa)
putative indolepyruvate oxidoreductase subunit B; K00180 indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
Pyruvate ferredoxin/flavodoxin oxidoreductase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X663_OCHA4
Pyruvate ferredoxin/flavodoxin oxidoreductase {ECO:0000313|EMBL:ABS16717.1}; Flags: Precursor;; TaxID=439375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168).;"
SCNpilot_cont_300_bf_scaffold_1946_curated_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1687..2208)
DNA (522bp) protein (174aa)
Transcriptional regulator, MarR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LQ63_RHITR
Transcriptional regulator {ECO:0000313|EMBL:KGM35492.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
transcriptional regulator, MarR family
SCNpilot_cont_300_bf_scaffold_1946_curated_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2258..3856)
DNA (1599bp) protein (533aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V005_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN87225.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_1946_curated_5
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4016..4801)
DNA (786bp) protein (262aa)
Cyclase family protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3I2Q9_9RHIZ
Cyclase family protein {ECO:0000313|EMBL:EPE94043.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
cyclase family protein
SCNpilot_cont_300_bf_scaffold_1946_curated_6
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5107..6678
DNA (1572bp) protein (524aa)
Phytoene dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J3CL71_9RHIZ
FAD dependent oxidoreductase {ECO:0000313|EMBL:EUC01169.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
FAD dependent oxidoreductase
SCNpilot_cont_300_bf_scaffold_1946_curated_7
Agrobacterium rubi, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6785..7282
DNA (498bp) protein (166aa)
Transcriptional activatory protein BadR n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V2D6_9RHIZ
Putative MarR family transcriptional regulator {ECO:0000313|EMBL:GAK69571.1}; TaxID=1220582 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rubi NBRC 13261.;"
transcriptional regulator, MarR family
SCNpilot_cont_300_bf_scaffold_1946_curated_8
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7474..9054
DNA (1581bp) protein (527aa)
hypothetical protein n=1 Tax=Streptomyces scabrisporus RepID=UPI00037A9EA6
Uncharacterized protein {ECO:0000313|EMBL:ETK30687.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
extracellular solute-binding protein; K02035 peptide/nickel transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1946_curated_9
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9072..9851
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI000363BDD9
Peptide ABC transporter permease {ECO:0000313|EMBL:ETK30688.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
binding-protein-dependent transporter inner membrane component; K02033 peptide/nickel transport system permease protein
Displaying 9 items

View Taxonomy