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SCNpilot_cont_300_bf_scaffold_4866_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4866_curated_1
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..214
DNA (213bp) protein (71aa)
manganese transporter n=1 Tax=Kaistia granuli RepID=UPI000369DD97
manganese transport protein MntH; K03322 manganese transport protein
Divalent metal cation transporter MntH {ECO:0000256|HAMAP-Rule:MF_00221}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
SCNpilot_cont_300_bf_scaffold_4866_curated_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(288..953)
DNA (666bp) protein (222aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
carbonic anhydrase (EC:4.2.1.1); K01673 carbonic anhydrase [EC:4.2.1.1]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037C2109
SCNpilot_cont_300_bf_scaffold_4866_curated_3
unknown

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1306..1509
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4866_curated_4
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1526..2068
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363052A
Putative uncharacterized protein {ECO:0000313|EMBL:EHK77965.1}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4866_curated_5
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2080..2577)
DNA (498bp) protein (166aa)
OsmC family protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0SWA7_CAUSK
OsmC family protein; K07397 putative redox protein
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34254.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
SCNpilot_cont_300_bf_scaffold_4866_curated_6
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2616..3425)
DNA (810bp) protein (270aa)
Outer membrane autotransporter n=1 Tax=Agrobacterium tumefaciens str. Cherry 2E-2-2 RepID=M8AX86_RHIRD
Outer membrane autotransporter {ECO:0000313|EMBL:EMS95611.1}; TaxID=1281779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens str. Cherry 2E-2-2.;"
outer membrane autotransporter
SCNpilot_cont_300_bf_scaffold_4866_curated_7
unknown

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4187..4420
DNA (234bp) protein (78aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4866_curated_8
Drosophila yakuba, Drosophila, Diptera, Neoptera, Arthropoda, Metazoa

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4799..6490
DNA (1692bp) protein (564aa)
GE24546 n=1 Tax=Drosophila yakuba RepID=B4PNN3_DROYA
GE24546 gene product from transcript GE24546-RA
GE24546 {ECO:0000313|EMBL:EDW97048.1}; TaxID=7245 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.;" source="Drosophila yakuba (Fruit fly).;"
SCNpilot_cont_300_bf_scaffold_4866_curated_9
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6577..7926
DNA (1350bp) protein (450aa)
hydroxydechloroatrazine ethylaminohydrolase AtzB; K03382 hydroxyatrazine ethylaminohydrolase [EC:3.5.99.3]
hydroxydechloroatrazine ethylaminohydrolase n=1 Tax=Rhizobium leguminosarum RepID=UPI00035C752B
Hydroxydechloroatrazine ethylaminohydrolase {ECO:0000313|EMBL:CDM61778.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
SCNpilot_cont_300_bf_scaffold_4866_curated_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7952..8692)
DNA (741bp) protein (247aa)
ROK family protein; K00886 polyphosphate glucokinase [EC:2.7.1.63]
ROK family protein n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAS7_STAND
ROK family protein {ECO:0000313|EMBL:ADH90944.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_4866_curated_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8718..10616)
DNA (1899bp) protein (633aa)
glucan 1,4-alpha-glucosidase (EC:3.2.1.3); K01178 glucoamylase [EC:3.2.1.3]
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:ADH90943.1}; EC=3.2.1.3 {ECO:0000313|EMBL:ADH90943.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
Glucan 1,4-alpha-glucosidase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7AAS6_STAND
SCNpilot_cont_300_bf_scaffold_4866_curated_12
unknown

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11097..11312
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4866_curated_13
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11406..12020
DNA (615bp) protein (205aa)
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49); K00036 glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49]
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
glucose-6-phosphate 1-dehydrogenase n=1 Tax=Xanthobacteraceae RepID=UPI00036C789A
Displaying 13 items

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