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SCNpilot_cont_300_bf_scaffold_3025_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3025_curated_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1264)
DNA (1263bp) protein (421aa)
FAD-linked oxidase n=1 Tax=Kaistia granuli RepID=UPI00036CE0F6
FAD linked oxidase domain-containing protein
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADZ69225.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_2
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1286..2599)
DNA (1314bp) protein (438aa)
codAch2; cytosine deaminase-like protein (EC:3.5.4.1); K01485 cytosine deaminase [EC:3.5.4.1]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003625E2C
Cytosine deaminase-like protein {ECO:0000313|EMBL:EKF57523.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
SCNpilot_cont_300_bf_scaffold_3025_curated_3
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2602..3456)
DNA (855bp) protein (285aa)
ABC transporter ATP-binding protein n=1 Tax=Kaistia granuli RepID=UPI000375E51C
nitrate/sulfonate/bicarbonate ABC transporter permease; K02050 NitT/TauT family transport system permease protein
Probable nitrate/sulfonate/bicarbonate ABC transporter, permease protein {ECO:0000313|EMBL:ADZ69223.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_4
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3453..4271)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003762495
ABC transporter permease/ATPase; K02049 NitT/TauT family transport system ATP-binding protein
ABC transporter nucleotide binding/ATPase protein {ECO:0000313|EMBL:ADZ69222.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_5
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4358..5371)
DNA (1014bp) protein (338aa)
Permease protein of ABC transporter n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IWC2_POLGS
ABC transporter permease; K02051 NitT/TauT family transport system substrate-binding protein
Permease protein of ABC transporter {ECO:0000313|EMBL:ADZ69221.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5693..6085
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036243E6
Endoribonuclease L-PSP {ECO:0000313|EMBL:KGM35787.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3025_curated_7
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6030..6848)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000346992E
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KJS24857.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
SCNpilot_cont_300_bf_scaffold_3025_curated_8
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6999..8027
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A0D6_9PROT
Membrane protein {ECO:0000313|EMBL:KFG70668.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3025_curated_9
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8111..9460
DNA (1350bp) protein (450aa)
hydroxydechloroatrazine ethylaminohydrolase AtzB; K03382 hydroxyatrazine ethylaminohydrolase [EC:3.5.99.3]
Hydroxydechloroatrazine ethylaminohydrolase n=1 Tax=Ahrensia sp. R2A130 RepID=E0MQT5_9RHOB
Hydroxydechloroatrazine ethylaminohydrolase {ECO:0000313|EMBL:EFL88752.1}; TaxID=744979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
SCNpilot_cont_300_bf_scaffold_3025_curated_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9592..10947
DNA (1356bp) protein (452aa)
hydroxydechloroatrazine ethylaminohydrolase AtzB; K03382 hydroxyatrazine ethylaminohydrolase [EC:3.5.99.3]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E7C1C
Putative hydroxydechloroatrazine ethylaminohydrolase (AtzB) (Hydroxyatrazine hydrolase) {ECO:0000313|EMBL:ADZ69217.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_11
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11242..11712
DNA (471bp) protein (157aa)
Creatininase subfamily; K01470 creatinine amidohydrolase [EC:3.5.2.10]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B2BBE
Creatininase {ECO:0000313|EMBL:EAV45800.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_12
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11818..12744
DNA (927bp) protein (309aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:EEX12098.1}; EC=1.1.1.95 {ECO:0000313|EMBL:EEX12098.1};; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
serA1; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369530D
SCNpilot_cont_300_bf_scaffold_3025_curated_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12890..14476
DNA (1587bp) protein (529aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D9E6F
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM35536.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
family 5 extracellular solute-binding protein; K12368 dipeptide transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_3025_curated_14
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14580..15590
DNA (1011bp) protein (337aa)
peptide ABC transporter permease n=1 Tax=Kaistia granuli RepID=UPI00036F8A2E
peptide/nickel transport system permease protein; K12369 dipeptide transport system permease protein
Peptide/nickel transport system permease protein {ECO:0000313|EMBL:BAI73900.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_15
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15580..16479
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363DC13
Peptide transporter {ECO:0000313|EMBL:KFL27610.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
binding-protein-dependent transporters inner membrane component; K12370 dipeptide transport system permease protein
SCNpilot_cont_300_bf_scaffold_3025_curated_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16483..17490
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B4BF7
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ENN88891.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
dppD; dipeptide ABC transporter component; K12371 dipeptide transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_3025_curated_17
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17487..18440
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037A7E59
oligopeptide/dipeptide ABC transporter ATPase; K12372 dipeptide transport system ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:ADH88123.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_3025_curated_18
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18536..19615
DNA (1080bp) protein (360aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003633487
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:ERP86076.1}; TaxID=1397530 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
cobW; cobalamin synthesis protein CobW
SCNpilot_cont_300_bf_scaffold_3025_curated_19
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19693..20679
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364BD17
WD repeat-containing protein {ECO:0000313|EMBL:EFO31395.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3025_curated_20
BJP_IG2158_Rhodobacterales_64_37, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20685..21020)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036A409C
putative signal peptide protein
Tax=BJP_IG2158_Rhodobacterales_64_37
Displaying 20 items

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