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SCNpilot_cont_300_bf_scaffold_3447_curated

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3447_curated_1
unknown

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comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3447_curated_2
Bacillus sp. OxB-1, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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660..1199
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2PFG8_9ACTO
Transcriptional regulator, arac family {ECO:0000313|EMBL:BAQ09567.1}; TaxID=98228 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. (strain OxB-1).;"
DNA-binding domain-containing protein, AraC-type
SCNpilot_cont_300_bf_scaffold_3447_curated_3
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1214..1450
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035E70EE
Uncharacterized protein {ECO:0000313|EMBL:CDX29561.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3447_curated_4
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1536..2231
DNA (696bp) protein (232aa)
UPI0003CF0ACA related cluster n=1 Tax=unknown RepID=UPI0003CF0ACA
Uncharacterized protein {ECO:0000313|EMBL:ESW94145.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
Rieske (2Fe-2S) domain-containing protein
SCNpilot_cont_300_bf_scaffold_3447_curated_5
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2228..2857
DNA (630bp) protein (210aa)
glutathione S-transferase domain; K00799 glutathione S-transferase [EC:2.5.1.18]
glutathione S-transferase n=1 Tax=Methylobacterium sp. MB200 RepID=UPI000349E816
Glutathione S-transferase {ECO:0000313|EMBL:KEA09159.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_300_bf_scaffold_3447_curated_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3010..3288
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IKS7_BEII9
Antitoxin {ECO:0000313|EMBL:KIZ43306.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3447_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3276..3806
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKZ8_RHOPX
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:ADU43387.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_300_bf_scaffold_3447_curated_8
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3853..4995
DNA (1143bp) protein (381aa)
adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2]
Adenine deaminase {ECO:0000255|HAMAP-Rule:MF_01518}; Short=Adenase {ECO:0000255|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000255|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000255|HAMAP-Rule:MF_01518};; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
adenine deaminase n=1 Tax=Kaistia granuli RepID=UPI00037B4E6B
SCNpilot_cont_300_bf_scaffold_3447_curated_9
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4992..5606
DNA (615bp) protein (205aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
ade; adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2]
adenine deaminase n=1 Tax=Kaistia granuli RepID=UPI00037B4E6B
SCNpilot_cont_300_bf_scaffold_3447_curated_10
unknown

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5603..6004
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003725B96
SCNpilot_cont_300_bf_scaffold_3447_curated_11
Cladophialophora bantiana, Cladophialophora, Chaetothyriales, Chaetothyriomycetidae, Ascomycota, Fungi

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6095..6421
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364F6A4
Unplaced genomic scaffold supercont1.5, whole genome shotgun sequence {ECO:0000313|EMBL:KIW95092.1}; TaxID=1442370 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Chaetothyriomycetidae; Chaetothyriales; Herpotrichiellaceae; Cladophialophora.;" source="Cladophialophora bantiana CBS 173.52.;"
NIPSNAP family protein
SCNpilot_cont_300_bf_scaffold_3447_curated_12
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6466..6909)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HEB8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE97152.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
SCNpilot_cont_300_bf_scaffold_3447_curated_13
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(7044..8213)
DNA (1170bp) protein (390aa)
mandelate racemase/muconate lactonizing protein; K01684 galactonate dehydratase [EC:4.2.1.6]
Enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase n=1 Tax=Saccharomonospora azurea NA-128 RepID=H8G8X3_9PSEU
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SCNpilot_cont_300_bf_scaffold_3447_curated_14
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(8213..9328)
DNA (1116bp) protein (372aa)
Putative quinate utilization oxidoreductase protein n=1 Tax=Botryosphaeria parva (strain UCR-NP2) RepID=R1ENI4_BOTPV
oxidoreductase domain-containing protein; K03810 virulence factor
Tax=RBG_16_Chloroflexi_54_18_curated
SCNpilot_cont_300_bf_scaffold_3447_curated_15
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

comp(9325..9858)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus acidoterrestris ATCC 49025 RepID=T0D5Y1_9BACL
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
SCNpilot_cont_300_bf_scaffold_3447_curated_16
Burkholderia lata, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10373..11386
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Burkholderia sp. (strain 383) RepID=Q39BJ9_BURS3
Uncharacterized protein {ECO:0000313|EMBL:ABB10162.1}; TaxID=482957 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194; / 383).;"
SCNpilot_cont_300_bf_scaffold_3447_curated_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11194..12687)
DNA (1494bp) protein (498aa)
ABC transporter-like protein; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
Ribose import ATP-binding protein RbsA 1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=RBSA1_RUBXD
ABC transporter related protein {ECO:0000313|EMBL:AHG87888.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
SCNpilot_cont_300_bf_scaffold_3447_curated_18
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(12749..13744)
DNA (996bp) protein (332aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U8X4_OCEP5
monosaccharide ABC transporter substrate-binding protein, cut2 family; K10439 ribose transport system substrate-binding protein
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:ADR36804.1}; Flags: Precursor;; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
SCNpilot_cont_300_bf_scaffold_3447_curated_19
Pseudomonas lutea, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13859..14905)
DNA (1047bp) protein (349aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036F0C1A
LacI family transcriptional regulator {ECO:0000313|EMBL:KGF65836.1}; TaxID=243924 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas lutea.;"
LacI family transcription regulator protein; K06145 LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
SCNpilot_cont_300_bf_scaffold_3447_curated_20
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

Not on your lists

15003..16103
DNA (1101bp) protein (367aa)
Putative uncharacterized protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYM2_RUBXD
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Displaying 20 items

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