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SCNpilot_cont_300_bf_scaffold_1894_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1894_curated_1
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..460
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037EBEEC
Uncharacterized protein {ECO:0000313|EMBL:CDX16172.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein; K09760 DNA recombination protein RmuC
SCNpilot_cont_300_bf_scaffold_1894_curated_2
Candidatus Accumulibacter sp. SK-11, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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475..873
DNA (399bp) protein (133aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036CD023
Uncharacterized protein {ECO:0000313|EMBL:EXI73391.1}; TaxID=1454000 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-11.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1894_curated_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(867..1478)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DDE2E
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SCNpilot_cont_300_bf_scaffold_1894_curated_4
Nitratireductor indicus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1489..2094)
DNA (606bp) protein (202aa)
recombinase RecR n=1 Tax=Kaistia granuli RepID=UPI00035F0F75
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1231190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor indicus C115.;"
recR; recombination protein RecR; K06187 recombination protein RecR rbh
SCNpilot_cont_300_bf_scaffold_1894_curated_5
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2114..2437)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362D20E
hypothetical protein; K09747 hypothetical protein
Nucleoid-associated protein RPB_0667 {ECO:0000255|HAMAP-Rule:MF_00274}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_300_bf_scaffold_1894_curated_6
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2468..4264)
DNA (1797bp) protein (599aa)
DNA polymerase III, subunits gamma and tau, putative {ECO:0000313|EMBL:EEE43267.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEE43267.1};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
DNA polymerase III subunits gamma and tau; K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037280BF
SCNpilot_cont_300_bf_scaffold_1894_curated_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4654..5622
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003700020
NUDIX hydrolase {ECO:0000313|EMBL:EHK58972.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Zn-finger containing NTP pyrophosphohydrolase
SCNpilot_cont_300_bf_scaffold_1894_curated_8
unknown

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5719..6546
DNA (828bp) protein (276aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1894_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6562..7410)
DNA (849bp) protein (283aa)
prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase {ECO:0000313|EMBL:ADH87585.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ADH87585.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000381F1B6
SCNpilot_cont_300_bf_scaffold_1894_curated_10
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7407..8219)
DNA (813bp) protein (271aa)
3-deoxy-manno-octulosonate cytidylyltransferase; K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000255|HAMAP-Rule:MF_00057}; EC=2.7.7.38 {ECO:0000255|HAMAP-Rule:MF_00057};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000255|HAMAP-Rule:MF_00057}; Short=CKS {ECO:0000255|HAMAP-Rule:MF_00057};; Short=CMP-KDO synthase {ECO:0000255|HAMAP-Rule:MF_00057};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003635D18
SCNpilot_cont_300_bf_scaffold_1894_curated_11
Mesorhizobium sp. LNHC229A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8393..9220
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000362AD49
Cysteine desulfurase {ECO:0000313|EMBL:ESY93830.1}; TaxID=1287240 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC229A00.;"
cytochrome c2
SCNpilot_cont_300_bf_scaffold_1894_curated_12
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10149..11213
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036EC670
Uncharacterized protein {ECO:0000313|EMBL:ERI13101.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
extracellular solute-binding protein; K13893 microcin C transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_1894_curated_13
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11210..11527
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037DEE58
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EHK58978.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC transporter substrate-binding protein; K13893 microcin C transport system substrate-binding protein
Displaying 13 items

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