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SCNpilot_cont_300_bf_scaffold_3125_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3125_curated_1
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..525
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364DF54
Transcriptional regulator {ECO:0000313|EMBL:ESZ20857.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulator/sugar kinase
SCNpilot_cont_300_bf_scaffold_3125_curated_2
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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522..1304
DNA (783bp) protein (261aa)
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375E19C
ABC transporter family protein {ECO:0000313|EMBL:AID29626.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
SCNpilot_cont_300_bf_scaffold_3125_curated_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1377..2420
DNA (1044bp) protein (348aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Kaistia granuli RepID=UPI00036F9132
Uncharacterized protein {ECO:0000313|EMBL:CDP52278.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter binding protein; K02058 simple sugar transport system substrate-binding protein rbh
SCNpilot_cont_300_bf_scaffold_3125_curated_4
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2482..3480
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036B8779
ABC transporter, permease protein {ECO:0000313|EMBL:CDP52277.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
ABC transporter permease; K02057 simple sugar transport system permease protein rbh
SCNpilot_cont_300_bf_scaffold_3125_curated_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3480..4274
DNA (795bp) protein (265aa)
short-chain dehydrogenase/reductase SDR; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003630D2F
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:KGM35260.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_300_bf_scaffold_3125_curated_6
Nitratireductor aquibiodomus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4280..5470
DNA (1191bp) protein (397aa)
aromatic amino acid beta-eliminating lyase/threonine aldolase; K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
L-seryl-tRNA(Sec) selenium transferase-related protein n=1 Tax=Nitratireductor aquibiodomus RA22 RepID=I5BZ33_9RHIZ
L-seryl-tRNA(Sec) selenium transferase-related protein {ECO:0000313|EMBL:EIM74835.1}; TaxID=1189611 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor aquibiodomus RA22.;"
SCNpilot_cont_300_bf_scaffold_3125_curated_7
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5473..5823)
DNA (351bp) protein (117aa)
hypothetical protein; K00537 arsenate reductase [EC:1.20.4.1]
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T3J3_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE01020.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
SCNpilot_cont_300_bf_scaffold_3125_curated_8
unknown

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5923..6114
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3125_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6129..6326)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPD4_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71955.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_3125_curated_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6523..7755
DNA (1233bp) protein (411aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E8BF5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL11263.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_300_bf_scaffold_3125_curated_11
Aeromicrobium marinum, Aeromicrobium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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7830..9638
DNA (1809bp) protein (603aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375D838
Putative sodium:solute symporter, VC_2705 subfamily {ECO:0000313|EMBL:EFQ84254.1}; TaxID=585531 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Aeromicrobium.;" source="Aeromicrobium marinum DSM 15272.;"
sodium symporter protein; K14393 cation/acetate symporter
SCNpilot_cont_300_bf_scaffold_3125_curated_12
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9652..10629
DNA (978bp) protein (326aa)
proline iminopeptidase; K01259 proline iminopeptidase [EC:3.4.11.5]
Proline iminopeptidase {ECO:0000256|RuleBase:RU003421}; EC=3.4.11.5 {ECO:0000256|RuleBase:RU003421};; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036BCE3C
SCNpilot_cont_300_bf_scaffold_3125_curated_13
unknown

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comp(10632..10907)
DNA (276bp) protein (92aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036AFA6E
Displaying 13 items

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