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SCNpilot_cont_300_bf_scaffold_4103_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4103_curated_1
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..860
DNA (858bp) protein (286aa)
sugar ABC transporter permease n=1 Tax=Rhizobium RepID=UPI0003755CAC
Putative ABC transporter permease protein {ECO:0000313|EMBL:CDM57701.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
ABC transporter permease; K02026 multiple sugar transport system permease protein
SCNpilot_cont_300_bf_scaffold_4103_curated_2
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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864..1979
DNA (1116bp) protein (372aa)
ABC transporter n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N543_9RHIZ
ABC transporter {ECO:0000313|EMBL:EKF19328.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
malK; maltose/maltodextrin import ATP-binding protein malK; K02023 multiple sugar transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_4103_curated_3
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2209..3711
DNA (1503bp) protein (501aa)
GMC family oxidoreductase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037189A1
Choline dehydrogenase-like flavoprotein {ECO:0000313|EMBL:EJL58268.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
glucose-methanol-choline oxidoreductase
SCNpilot_cont_300_bf_scaffold_4103_curated_4
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3708..4469
DNA (762bp) protein (254aa)
UPI0003CDFF03 related cluster n=1 Tax=unknown RepID=UPI0003CDFF03
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CDX11054.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_300_bf_scaffold_4103_curated_5
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4552..5697
DNA (1146bp) protein (382aa)
dehydrogenase/oxidoreductase; K00119 [EC:1.1.99.-]
alanine-phosphoribitol ligase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037B34D8
Putative dehydrogenase/oxidoreductase {ECO:0000313|EMBL:CAK07324.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_300_bf_scaffold_4103_curated_6
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5658..6131
DNA (474bp) protein (158aa)
L-sorbose dehydrogenase {ECO:0000313|EMBL:CAC47874.1}; EC=1.1.99.- {ECO:0000313|EMBL:CAC47874.1};; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
L-sorbose 1-dehydrogenase n=1 Tax=Sinorhizobium meliloti Rm41 RepID=K0P334_RHIML
L-sorbose dehydrogenase
SCNpilot_cont_300_bf_scaffold_4103_curated_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6152..6460
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000374C4F2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACP27044.1}; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
SCNpilot_cont_300_bf_scaffold_4103_curated_8
bacterium YEK0313, Bacteria

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comp(6567..9836)
DNA (3270bp) protein (1090aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
DNA polymerase III subunit alpha; K14162 error-prone DNA polymerase [EC:2.7.7.7]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379EC57
SCNpilot_cont_300_bf_scaffold_4103_curated_9
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9833..10225)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000371D7C3
imuB protein
ImuB protein {ECO:0000313|EMBL:CCJ06698.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
Displaying 9 items

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