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SCNpilot_cont_300_bf_scaffold_4032_curated

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4032_curated_1
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..542)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000382021B
Uncharacterized protein {ECO:0000313|EMBL:ESZ29809.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_4032_curated_2
bacterium YEK0313, Bacteria

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708..1319
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000375BDC1
UPF0301 protein BN1110_04593 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
hypothetical protein; K07735 putative transcriptional regulator
SCNpilot_cont_300_bf_scaffold_4032_curated_3
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1326..2087)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363A82D
Cytochrome oxidase biogenesis protein Surf1, facilitates heme A insertion {ECO:0000313|EMBL:ESR24933.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
SURF1 family protein; K14998 surfeit locus 1 family protein
SCNpilot_cont_300_bf_scaffold_4032_curated_4
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2121..2531)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364E697
Putative uncharacterized protein {ECO:0000313|EMBL:EEE45327.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
cytochrome c oxidase subunit III
SCNpilot_cont_300_bf_scaffold_4032_curated_5
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2594..3433)
DNA (840bp) protein (280aa)
cytochrome c oxidase subunit III; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1]
cytochrome B562 n=1 Tax=Kaistia granuli RepID=UPI00036F1B65
Cytochrome c oxidase subunit III {ECO:0000313|EMBL:ABS62296.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
SCNpilot_cont_300_bf_scaffold_4032_curated_6
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3455..4087)
DNA (633bp) protein (211aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000369E247
cytochrome C oxidase assembly protein; K02258 cytochrome c oxidase assembly protein subunit 11
Cytochrome c oxidase assembly protein CtaG {ECO:0000256|HAMAP-Rule:MF_00155}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_300_bf_scaffold_4032_curated_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4096..4290)
DNA (195bp) protein (65aa)
CoxF protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IDL0_AZOC5
coxF; CoxF protein
CoxF protein {ECO:0000313|EMBL:BAF88955.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_4032_curated_8
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4287..4592)
DNA (306bp) protein (102aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-]
Protoheme IX farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_00154};; Heme B farnesyltransferase {ECO:0000256|HAMAP-Rule:MF_00154}; Heme O synthase {ECO:0000256|HAMAP-Rule:MF_00154}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036E9A0C
SCNpilot_cont_300_bf_scaffold_4032_curated_9
unknown

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4702..4950
DNA (249bp) protein (83aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_4032_curated_10
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5158..5541)
DNA (384bp) protein (128aa)
Cytochrome c oxidase, subunit I {ECO:0000313|EMBL:EFO34480.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EFO34480.1};; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
coxA; cytochrome C oxidase polypeptide I transmembrane protein; K02274 cytochrome c oxidase subunit I [EC:1.9.3.1]
cytochrome C oxidase subunit I n=1 Tax=Kaistia granuli RepID=UPI000374D55E
Displaying 10 items

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