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SCNpilot_cont_300_bf_scaffold_7256_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_7256_curated_1
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..271
DNA (270bp) protein (90aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=472175 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Kaistia granuli RepID=UPI000363F504
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
SCNpilot_cont_300_bf_scaffold_7256_curated_2
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(333..1298)
DNA (966bp) protein (322aa)
diguanylate cyclase n=1 Tax=Citromicrobium sp. JLT1363 RepID=UPI000225EC7B
Diguanylate cyclase {ECO:0000313|EMBL:EQB30358.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
putative diguanylate cyclase
SCNpilot_cont_300_bf_scaffold_7256_curated_3
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2121..2471
DNA (351bp) protein (117aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037E4D39
Integral membrane protein DUF6 {ECO:0000313|EMBL:EEE46233.1}; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_7256_curated_4
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2722..2862)
DNA (141bp) protein (47aa)
rbsA4; ribose import ATP-binding protein RbsA (EC:3.6.3.17)
ABC transporter ATP-binding protein n=1 Tax=Kaistia granuli RepID=UPI00035EBF7A
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESZ09445.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
SCNpilot_cont_300_bf_scaffold_7256_curated_5
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3452..5737)
DNA (2286bp) protein (762aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003634D5C
Sugar ABC transporter permease {ECO:0000313|EMBL:ESZ09446.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
rbsc5; Autoinducer 2 import system permease protein lsrC AI-2 import system permease protein lsrC
SCNpilot_cont_300_bf_scaffold_7256_curated_6
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5925..6398)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036BA95D
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJJ30153.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
HTH-type transcriptional repressor purR Purine nucleotide synthesis repressor; Pur regulon repressor
SCNpilot_cont_300_bf_scaffold_7256_curated_7
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7200..8126)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003606FA8
Uncharacterized protein {ECO:0000313|EMBL:KEC76914.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
Dihydrodipicolinate synthase DHDPS
SCNpilot_cont_300_bf_scaffold_7256_curated_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8241..9053)
DNA (813bp) protein (271aa)
IclR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI000362AE17
IclR family transcriptional regulator protein {ECO:0000313|EMBL:AJD44444.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
IclR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_7256_curated_9
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9210..10271
DNA (1062bp) protein (354aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B7782E
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:AJD44443.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
putative substrate-binding component of ABC transporter; K02058 simple sugar transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_7256_curated_10
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10299..11807
DNA (1509bp) protein (503aa)
sugar ABC transporter, ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter ATP-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036A6818
Probable sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ABC93378.1}; TaxID=347834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CFN 42 / ATCC 51251).;"
SCNpilot_cont_300_bf_scaffold_7256_curated_11
Brucella sp. BO2, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11804..12022
DNA (219bp) protein (73aa)
Permease component of ABC transporter n=2 Tax=Brucella RepID=E0DS39_9RHIZ
Bacterial inner-membrane translocator; K02057 simple sugar transport system permease protein
Permease component of ABC transporter {ECO:0000313|EMBL:EFM60174.1}; TaxID=693750 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. BO2.;"
Displaying 11 items

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