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SCNpilot_cont_300_bf_scaffold_3117_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3117_curated_1
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..177)
DNA (177bp) protein (59aa)
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 (EC:3.4.16.4); K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 {ECO:0000313|EMBL:ACL61506.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ACL61506.1};; Flags: Precursor;; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368CD6E
SCNpilot_cont_300_bf_scaffold_3117_curated_2
bacterium YEK0313, Bacteria

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229..1221
DNA (993bp) protein (331aa)
Urease accessory protein UreD n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZC3_POLGS
Urease accessory protein UreD {ECO:0000313|EMBL:CEJ13368.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
urease accessory protein UreD; K03190 urease accessory protein
SCNpilot_cont_300_bf_scaffold_3117_curated_3
Rhizobium sp. R1-200B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1249..1551
DNA (303bp) protein (101aa)
Urease subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_00739, ECO:0000256|RuleBase:RU003850};; Urea amidohydrolase subunit gamma {ECO:0000256|HAMAP-Rule:MF_00739}; TaxID=1509405 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R1-200B4.;"
ureA; Urease gamma subunit (Urea amidohydrolase gamma subunit) (EC:3.5.1.5)
Urease subunit gamma n=1 Tax=Rhizobium sp. RepID=L0NJ09_RHISP
SCNpilot_cont_300_bf_scaffold_3117_curated_4
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1560..1826
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Singularimonas variicoloris RepID=UPI000366C45D
Strain MEJ076 contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ02886.1}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
hypothetical protein; K09984 hypothetical protein
SCNpilot_cont_300_bf_scaffold_3117_curated_5
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2224..3936
DNA (1713bp) protein (571aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1107881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti CCNWSX0020.;"
ureC; urease alpha subunit; K01428 urease subunit alpha [EC:3.5.1.5]
urease subunit alpha n=1 Tax=Rhizobium meliloti RepID=UPI000360A7F2
SCNpilot_cont_300_bf_scaffold_3117_curated_6

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3946..4434
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZH39_ANACC
Uncharacterized protein {ECO:0000313|EMBL:KKN84498.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
protein of unknown function DUF29
SCNpilot_cont_300_bf_scaffold_3117_curated_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4388..5107)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000376467F
Uncharacterized protein {ECO:0000313|EMBL:ETR79014.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
SCNpilot_cont_300_bf_scaffold_3117_curated_8
bacterium YEK0313, Bacteria

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5113..5844
DNA (732bp) protein (244aa)
Urease accessory protein UreF n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RXX2_9BRAD
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
urease accessory protein UreF; K03188 urease accessory protein
SCNpilot_cont_300_bf_scaffold_3117_curated_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5841..6467
DNA (627bp) protein (209aa)
Urease accessory protein UreG n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A8Z8_STAND
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
urease accessory protein UreG; K03189 urease accessory protein
SCNpilot_cont_300_bf_scaffold_3117_curated_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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6522..7691
DNA (1170bp) protein (390aa)
amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036FD01E
Amidohydrolase family protein {ECO:0000313|EMBL:ADZ68803.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3117_curated_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7679..8671)
DNA (993bp) protein (331aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000363F807
Integral membrane protein TerC {ECO:0000313|EMBL:EGJ11576.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
integral membrane protein TerC; K05794 tellurite resistance protein TerC
Displaying 11 items

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