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SCNpilot_cont_300_bf_scaffold_13500_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_13500_curated_1
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..682)
DNA (681bp) protein (227aa)
ABC transporter substrate-binding protein n=1 Tax=Kaistia granuli RepID=UPI00036E9424
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EIZ86075.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
ABC transporter substrate-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
SCNpilot_cont_300_bf_scaffold_13500_curated_2

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comp(729..1715)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000370EC62
Uncharacterized protein {ECO:0000313|EMBL:KKN63821.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ABC transporter-like protein; K02052 putative spermidine/putrescine transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_13500_curated_3
unknown

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comp(2164..2361)
DNA (198bp) protein (66aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_13500_curated_4
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2837..3103
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000364DACA
Uncharacterized protein {ECO:0000313|EMBL:ETR78669.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_13500_curated_5
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3341..4693
DNA (1353bp) protein (451aa)
putative oxidoreductase; K00266 glutamate synthase (NADPH/NADH) small chain [EC:1.4.1.13 1.4.1.14]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000382CC3F
Glutamate synthase, beta subunit {ECO:0000313|EMBL:EAS51739.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_300_bf_scaffold_13500_curated_6
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4708..4950
DNA (243bp) protein (81aa)
dihydropyrimidine dehydrogenase (EC:1.3.1.1 1.3.1.2); K00207 dihydropyrimidine dehydrogenase (NADP+) [EC:1.3.1.2]
dihydropyrimidine dehydrogenase subunit B n=1 Tax=Kaistia granuli RepID=UPI0003775596
Putative FMN-linked oxidoreductase dihydropyrimidine/dihydroorate dehydrogenase {ECO:0000313|EMBL:CCE09672.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
Displaying 6 items

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