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SCNpilot_cont_300_bf_scaffold_5331_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_5331_curated_1
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..560)
DNA (558bp) protein (186aa)
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:ESR24260.1}; EC=2.3.1.- {ECO:0000313|EMBL:ESR24260.1};; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
lipid A biosynthesis lauroyl acyltransferase; K02517 lipid A biosynthesis lauroyl acyltransferase [EC:2.3.1.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003710930
SCNpilot_cont_300_bf_scaffold_5331_curated_2
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(598..1293)
DNA (696bp) protein (232aa)
alcohol dehydrogenase (EC:1.1.1.1)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00038278F4
Alcohol dehydrogenase {ECO:0000313|EMBL:EHJ97492.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
SCNpilot_cont_300_bf_scaffold_5331_curated_3
unknown

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1833..2009
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5331_curated_4
unknown

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2099..3073
DNA (975bp) protein (325aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_5331_curated_5
bacterium YEK0313, Bacteria

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comp(2954..4174)
DNA (1221bp) protein (407aa)
3-oxoacyl-(acyl carrier protein) synthase II; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036312E4
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000313|EMBL:CEJ13972.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_300_bf_scaffold_5331_curated_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4171..4638)
DNA (468bp) protein (156aa)
beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366F7AF
Beta-hydroxyacyl-(Acyl-carrier-protein) dehydratase FabA/FabZ {ECO:0000313|EMBL:ACL56857.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_300_bf_scaffold_5331_curated_7
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4660..4941)
DNA (282bp) protein (94aa)
acyl carrier protein n=1 Tax=Kaistia granuli RepID=UPI00037F0BE5
acyl carrier protein
Acyl carrier protein {ECO:0000313|EMBL:BAF88401.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_5331_curated_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5105..5986)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003623DE3
transglutaminase domain-containing protein
Transglutaminase, N-terminal domain protein {ECO:0000313|EMBL:ABJ04045.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_300_bf_scaffold_5331_curated_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5989..7923)
DNA (1935bp) protein (645aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F2093
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH91633.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_5331_curated_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8027..8416)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035F2093
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH91633.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_300_bf_scaffold_5331_curated_11
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8427..8741)
DNA (315bp) protein (105aa)
IMP dehydrogenase n=1 Tax=Kaistia granuli RepID=UPI00035FEB9E
transglutaminase domain-containing protein
Transglutaminase domain protein {ECO:0000313|EMBL:ACK49191.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Displaying 11 items

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