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SCNpilot_cont_300_bf_scaffold_1985_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1985_curated_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(64..351)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037AF7D6
Uncharacterized protein {ECO:0000313|EMBL:KGM34236.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
amidohydrolase; K07046
SCNpilot_cont_300_bf_scaffold_1985_curated_2
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(937..2091)
DNA (1155bp) protein (385aa)
UPI0003CE6988 related cluster n=1 Tax=unknown RepID=UPI0003CE6988
Uncharacterized protein {ECO:0000313|EMBL:ESY76668.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
(S)-2-hydroxy-acid oxidase
SCNpilot_cont_300_bf_scaffold_1985_curated_3
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2601..2807
DNA (207bp) protein (69aa)
UPI0003CFB7F3 related cluster n=1 Tax=unknown RepID=UPI0003CFB7F3
Uncharacterized protein {ECO:0000313|EMBL:ESY76667.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
SCNpilot_cont_300_bf_scaffold_1985_curated_4
unknown

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3363..3773
DNA (411bp) protein (137aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1985_curated_5
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3922..4986)
DNA (1065bp) protein (355aa)
Sugar ABC transporter permease protein n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZCD3_ROSLO
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM35451.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
sugar ABC transporter permease
SCNpilot_cont_300_bf_scaffold_1985_curated_6
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4983..6536)
DNA (1554bp) protein (518aa)
sugar ABC transporter ATP-binding protein; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17]
Sugar ABC transporter, ATP-binding protein, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16BV9_ROSDO
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM35452.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
SCNpilot_cont_300_bf_scaffold_1985_curated_7
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6621..7748)
DNA (1128bp) protein (376aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YIL5_9BRAD
Ribose ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM35453.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_1985_curated_8
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8094..9056
DNA (963bp) protein (321aa)
phosphate butyryltransferase (EC:2.3.1.19); K00625 phosphate acetyltransferase [EC:2.3.1.8]
Phosphate butyryltransferase {ECO:0000313|EMBL:ACK51627.1}; EC=2.3.1.19 {ECO:0000313|EMBL:ACK51627.1};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Phosphate butyryltransferase n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ERS9_METSB
SCNpilot_cont_300_bf_scaffold_1985_curated_9
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(9085..10593)
DNA (1509bp) protein (503aa)
hypothetical protein n=1 Tax=Methyloferula stellata RepID=UPI0003745206
Uncharacterized protein {ECO:0000313|EMBL:EIM27694.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
CHAD domain-containing protein
SCNpilot_cont_300_bf_scaffold_1985_curated_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10672..11922)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IPM3_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS69969.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_1985_curated_11
Thioclava pacifica, Thioclava, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11965..12828)
DNA (864bp) protein (288aa)
Lead, cadmium, zinc and mercury transporting ATPase n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RL74_9RHIZ
Haloacid dehalogenase {ECO:0000313|EMBL:KEO50943.1}; TaxID=1353537 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thioclava.;" source="Thioclava pacifica DSM 10166.;"
Displaying 11 items

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