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SCNpilot_cont_300_bf_scaffold_3041_curated

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3041_curated_1
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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16..588
DNA (573bp) protein (191aa)
Hypothetical Cytosolic Protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZH3_POLGS
hypothetical protein
Hypothetical Cytosolic Protein {ECO:0000313|EMBL:ADZ68596.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3041_curated_2
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(611..1087)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000370841F
SEC-independent protein translocase protein TatC {ECO:0000313|EMBL:EEX11739.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. SE45.;"
SEC-independent protein translocase protein TatC; K06886 hemoglobin
SCNpilot_cont_300_bf_scaffold_3041_curated_3
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1331..2587
DNA (1257bp) protein (419aa)
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00037BFAD6
DadA protein {ECO:0000313|EMBL:BAQ43644.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
SCNpilot_cont_300_bf_scaffold_3041_curated_4
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2591..3013)
DNA (423bp) protein (141aa)
Short chain alcohol dehydrogenase-related dehydrogenase n=1 Tax=Celeribacter baekdonensis B30 RepID=K2K1C5_9RHOB
Short chain alcohol dehydrogenase-related dehydrogenase {ECO:0000313|EMBL:AJE46874.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
short chain alcohol dehydrogenase
SCNpilot_cont_300_bf_scaffold_3041_curated_5
R_Betaproteobacteria_67_26, Betaproteobacteria, Proteobacteria, Bacteria

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3478..4725
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00036F8865
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated
SCNpilot_cont_300_bf_scaffold_3041_curated_6
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4758..5399)
DNA (642bp) protein (214aa)
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FF8D9
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
SCNpilot_cont_300_bf_scaffold_3041_curated_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5399..5773)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003796092
Uncharacterized protein {ECO:0000313|EMBL:EKE72953.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_300_bf_scaffold_3041_curated_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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6021..6584
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003642D11
MarR family transcriptional regulator {ECO:0000313|EMBL:EKE72950.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative transcriptional regulatory protein,MarR family
SCNpilot_cont_300_bf_scaffold_3041_curated_9
unknown

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comp(7294..7662)
DNA (369bp) protein (123aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_3041_curated_10
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7877..8608
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000368D54E
Extracellular solute-binding protein {ECO:0000313|EMBL:AJE46875.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
probabable ABC transporter, periplasmic solute-binding protein
SCNpilot_cont_300_bf_scaffold_3041_curated_11
Celeribacter indicus, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8747..9667
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000369E467
ABC-type dipeptide/oligopeptide/nickel transport systems, permease component {ECO:0000313|EMBL:AJE46876.1}; TaxID=1208324 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter indicus.;"
ABC transporter permease; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_3041_curated_12
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9671..10654
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000370B4D9
binding-protein-dependent transport systems inner membrane component; K02034 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABR63844.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_300_bf_scaffold_3041_curated_13
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10660..11682
DNA (1023bp) protein (341aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000379C2C6
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:EKE71249.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
oligopeptide/dipeptide ABC transporter, ATPase subunit; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_300_bf_scaffold_3041_curated_14
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11691..12698
DNA (1008bp) protein (336aa)
oligopeptide/dipeptide ABC transporter ATPase (EC:3.6.3.24); K02032 peptide/nickel transport system ATP-binding protein
Oligopeptide/dipeptide ABC transporter, ATPase subunit {ECO:0000313|EMBL:AEG07384.1}; EC=3.6.3.24 {ECO:0000313|EMBL:AEG07384.1};; Flags: Precursor;; TaxID=698936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain BL225C).;"
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000378F627
SCNpilot_cont_300_bf_scaffold_3041_curated_15
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12709..13986)
DNA (1278bp) protein (426aa)
gamma-glutamyltransferase (EC:2.3.2.2); K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2]
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACB36606.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACB36606.1};; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
gamma-glutamyltransferase n=1 Tax=Cupriavidus sp. WS RepID=UPI0003696735
Displaying 15 items

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