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SCNpilot_cont_300_bf_scaffold_2521_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2521_curated_1
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..1150)
DNA (1149bp) protein (383aa)
DNA topoisomerase 4 subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00938};; Topoisomerase IV subunit B {ECO:0000256|HAMAP-Rule:MF_00938}; TaxID=520449 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
DNA topoisomerase IV subunit B (EC:5.99.1.3); K02622 topoisomerase IV subunit B [EC:5.99.1.-]
DNA topoisomerase IV subunit B n=1 Tax=Kaistia granuli RepID=UPI000371FBEC
SCNpilot_cont_300_bf_scaffold_2521_curated_2
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2141..2968
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037199FC
Putative Exopolysaccharide regulatory protein exoR {ECO:0000313|EMBL:EJW12212.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
exopolysaccharide regulatory protein; K07126
SCNpilot_cont_300_bf_scaffold_2521_curated_3
unknown

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comp(2952..3869)
DNA (918bp) protein (306aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2521_curated_4
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3955..5262
DNA (1308bp) protein (436aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035E7CA9
Uncharacterized protein {ECO:0000313|EMBL:KGM30342.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
OmpA/MotB domain protein; K03286 OmpA-OmpF porin, OOP family
SCNpilot_cont_300_bf_scaffold_2521_curated_5
unknown

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comp(5300..5899)
DNA (600bp) protein (200aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2521_curated_6
unknown

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comp(6328..6504)
DNA (177bp) protein (59aa)
Alpha/beta hydrolase fold protein n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QUA2_METTR
SCNpilot_cont_300_bf_scaffold_2521_curated_7
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7202..9337)
DNA (2136bp) protein (712aa)
lytic transglycosylase; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] rbh
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003693B65
Soluble lytic transglycosylase {ECO:0000313|EMBL:EAS48598.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
SCNpilot_cont_300_bf_scaffold_2521_curated_8
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9636..10511
DNA (876bp) protein (292aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
dihydrodipicolinate synthase (EC:4.2.1.52); K01714 dihydrodipicolinate synthase [EC:4.2.1.52]
dihydrodipicolinate synthase n=1 Tax=Kaistia granuli RepID=UPI00036DC2CD
SCNpilot_cont_300_bf_scaffold_2521_curated_9
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10525..11001
DNA (477bp) protein (159aa)
single-stranded DNA-binding protein n=1 Tax=Kaistia granuli RepID=UPI00037A66C5
smpB; SsrA-binding protein; K03664 SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_300_bf_scaffold_2521_curated_10
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11520..12776)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003762215
outer membrane protein 1
Putative outer membrane protein 1 {ECO:0000313|EMBL:BAF87211.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_300_bf_scaffold_2521_curated_11
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13145..13810)
DNA (666bp) protein (222aa)
uracil-DNA glycosylase n=1 Tax=Xanthobacteraceae RepID=UPI000368C023
uracil-DNA glycosylase
Uracil-DNA glycosylase superfamily protein {ECO:0000313|EMBL:BAF87249.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
Displaying 11 items

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