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SCNpilot_cont_300_bf_scaffold_8189_curated

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_8189_curated_1
Pseudomonas sp. H2, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10..855)
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000367261B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGI91312.1}; TaxID=658612 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. H2.;"
SCNpilot_cont_300_bf_scaffold_8189_curated_2
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(945..2081)
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379314C
radical SAM family protein
Radical SAM {ECO:0000313|EMBL:ABG62104.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_300_bf_scaffold_8189_curated_3
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2192..2908
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000361B383
Uncharacterized protein {ECO:0000313|EMBL:EAV43409.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_8189_curated_4
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2827..3159)
DNA (333bp) protein (111aa)
Molybdenum cofactor biosynthesis protein B n=1 Tax=Microvirga sp. WSM3557 RepID=I4YQ24_9RHIZ
Molybdenum cofactor biosynthesis protein B {ECO:0000256|PIRNR:PIRNR006443}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
molybdenum cofactor biosynthesis protein B; K03638 molybdenum cofactor biosynthesis protein B
SCNpilot_cont_300_bf_scaffold_8189_curated_5
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3431..4318)
DNA (888bp) protein (296aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148); K00919 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003669B1D
SCNpilot_cont_300_bf_scaffold_8189_curated_6
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4315..6279)
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000364A165
Uncharacterized protein {ECO:0000313|EMBL:KJC58575.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_8189_curated_7
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6377..6631)
DNA (255bp) protein (85aa)
polyprenyl synthetase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003762BA0
Decaprenyl diphosphate synthase {ECO:0000313|EMBL:AIC32316.1}; Flags: Fragment;; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
SCNpilot_cont_300_bf_scaffold_8189_curated_8
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7547..7780
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000371B0A1
Protein of unknown function (DUF2007)
Uncharacterized protein {ECO:0000313|EMBL:ESX83146.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
SCNpilot_cont_300_bf_scaffold_8189_curated_9
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8140..8550
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036804E0
Methyltransferase small {ECO:0000313|EMBL:EFO30656.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
methyltransferase small
SCNpilot_cont_300_bf_scaffold_8189_curated_10
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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8576..9439
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000366B164
Na(+)/H(+) antiporter NhaA {ECO:0000313|EMBL:EFO34407.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
peptidase, S49 (protease IV) family
SCNpilot_cont_300_bf_scaffold_8189_curated_11
unknown

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9535..9723
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000377E646
SCNpilot_cont_300_bf_scaffold_8189_curated_12
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10097..10966)
DNA (870bp) protein (290aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
glyS; glycyl-tRNA synthetase subunit beta (EC:6.1.1.14); K01879 glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000379CA36
SCNpilot_cont_300_bf_scaffold_8189_curated_13
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11025..11633
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Aeromonas aquariorum RepID=UPI00029AB2EF
Uncharacterised protein {ECO:0000313|EMBL:CRE09446.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
Displaying 13 items

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