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SCNpilot_cont_300_bf_scaffold_2680_curated

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_2680_curated_1
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..879)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI0003749546
Amidohydrolase family protein {ECO:0000313|EMBL:AJW99424.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
cytosine deaminase
SCNpilot_cont_300_bf_scaffold_2680_curated_2
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(983..1864)
DNA (882bp) protein (294aa)
putative galactose mutarotase (EC:5.1.3.3)
UPI0003D5E5B1 related cluster n=1 Tax=unknown RepID=UPI0003D5E5B1
Aldose 1-epimerase {ECO:0000313|EMBL:ETI63313.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
SCNpilot_cont_300_bf_scaffold_2680_curated_3
Rhodobacteraceae bacterium PD-2, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1933..2157)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036141E0
Contig17, whole genome shotgun sequence {ECO:0000313|EMBL:ETA49503.2}; TaxID=1169855 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium PD-2.;"
putative NAD-dependent formate dehydrogenase
SCNpilot_cont_300_bf_scaffold_2680_curated_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2147..2977)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000368B2C2
formate dehydrogenase accessory protein; K02379 FdhD protein
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_300_bf_scaffold_2680_curated_5
Agrobacterium albertimagni, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2982..5876)
DNA (2895bp) protein (965aa)
formate dehydrogenase subunit alpha (EC:1.2.1.2); K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2]
Formate dehydrogenase subunit alpha n=1 Tax=Agrobacterium albertimagni AOL15 RepID=K2Q880_9RHIZ
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:EKF61400.1}; TaxID=1156935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium albertimagni AOL15.;"
SCNpilot_cont_300_bf_scaffold_2680_curated_6
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5887..7449)
DNA (1563bp) protein (521aa)
NAD-dependent formate dehydrogenase beta subunit (fdsB) (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit
NAD-dependent formate dehydrogenase beta subunit (FdsB) {ECO:0000313|EMBL:AHJ63817.1}; EC=1.2.1.2 {ECO:0000313|EMBL:AHJ63817.1};; TaxID=1052004 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis CGDNIH3.;"
formate dehydrogenase subunit beta n=1 Tax=Kaistia granuli RepID=UPI0003815189
SCNpilot_cont_300_bf_scaffold_2680_curated_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7446..7907)
DNA (462bp) protein (154aa)
formate dehydrogenase subunit gamma n=1 Tax=Kaistia granuli RepID=UPI000373AB5C
ATP synthase subunit E {ECO:0000313|EMBL:KIZ40857.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
NADH dehydrogenase I subunit E; K00127 formate dehydrogenase, gamma subunit
SCNpilot_cont_300_bf_scaffold_2680_curated_8
unknown

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comp(7904..8524)
DNA (621bp) protein (207aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_2680_curated_9
unknown

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8717..8785
DNA (69bp) protein (23aa)

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Displaying 9 items

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