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SCNpilot_cont_300_bf_scaffold_3330_curated

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_3330_curated_1
Ketogulonicigenium vulgare, Ketogulonicigenium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1295)
DNA (1293bp) protein (431aa)
D,D-dipeptide-binding periplasmic protein ddpA n=2 Tax=Ketogulonicigenium vulgare RepID=E3F5M3_KETVY
Twin-arginine translocation pathway signal
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:AEM42704.1}; TaxID=759362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ketogulonicigenium.;" source="Ketogulonicigenium vulgare (strain WSH-001).;"
SCNpilot_cont_300_bf_scaffold_3330_curated_2
Sinorhizobium medicae, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1932..2567
DNA (636bp) protein (212aa)
Transcriptional regulator, XRE family n=1 Tax=Sinorhizobium medicae (strain WSM419) RepID=A6UEQ1_SINMW
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABR62131.1}; TaxID=366394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium medicae (strain WSM419) (Ensifer medicae).;"
SCNpilot_cont_300_bf_scaffold_3330_curated_3
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2637..3305
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Burkholderia pseudomallei (strain 1710b) RepID=Q3JV35_BURP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA47803.1}; TaxID=320372 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia pseudomallei (strain 1710b).;"
SCNpilot_cont_300_bf_scaffold_3330_curated_4
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4015..4650
DNA (636bp) protein (212aa)
Transporter, major facilitator family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW71_9RHIZ
Arabinose polymer transporter {ECO:0000313|EMBL:KFC66688.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
major facilitator superfamily protein; K08156 MFS transporter, DHA1 family, arabinose polymer transporter
SCNpilot_cont_300_bf_scaffold_3330_curated_5
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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4684..5721
DNA (1038bp) protein (346aa)
aldo/keto reductase n=1 Tax=Burkholderia kururiensis RepID=UPI00034536CA
Aldo/keto reductase {ECO:0000313|EMBL:ESQ84767.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
aldo/keto reductase
SCNpilot_cont_300_bf_scaffold_3330_curated_6
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6127..6273)
DNA (147bp) protein (49aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
aspartyl-tRNA synthetase n=1 Tax=Kaistia granuli RepID=UPI000366B5E8
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KFG68775.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
SCNpilot_cont_300_bf_scaffold_3330_curated_7
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6492..7943
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Burkholderia pseudomallei RepID=UPI0001631E11
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
SCNpilot_cont_300_bf_scaffold_3330_curated_8
Erythrobacter sp. NAP1, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7953..8708)
DNA (756bp) protein (252aa)
Cyclic nucleotide-binding domain protein n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WFF0_9SPHN
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EAQ28169.1}; TaxID=237727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. NAP1.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_3330_curated_9
Labrenzia alexandrii, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9055..10215
DNA (1161bp) protein (387aa)
rnd; ribonuclease d protein; K03684 ribonuclease D [EC:3.1.13.5]
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=244592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia alexandrii (strain DSM 17067 / NCIMB 14079 / DFL-11); (Stappia alexandrii).;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360794A
SCNpilot_cont_300_bf_scaffold_3330_curated_10
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10228..11745)
DNA (1518bp) protein (506aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003600CA5
Ppx/GppA phosphatase family {ECO:0000313|EMBL:ADZ70804.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
SCNpilot_cont_300_bf_scaffold_3330_curated_11
Brucella neotomae, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(11759..12295)
DNA (537bp) protein (179aa)
polyphosphate kinase; K00937 polyphosphate kinase [EC:2.7.4.1]
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=520456 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella neotomae 5K33.;"
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036D8A13
Displaying 11 items

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