ggKbase home page

SCNpilot_cont_300_bf_scaffold_4108_curated

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_4108_curated_1
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..229)
DNA (228bp) protein (76aa)
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
alcohol dehydrogenase class III (EC:1.1.1.1); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
alcohol dehydrogenase n=1 Tax=Pseudochrobactrum sp. AO18b RepID=UPI00039D391A
SCNpilot_cont_300_bf_scaffold_4108_curated_2
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

648..2129
DNA (1482bp) protein (494aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EK31_METSB
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACK49978.1}; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_300_bf_scaffold_4108_curated_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2134..2754)
DNA (621bp) protein (207aa)
glutathione S-transferase n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D98F80
glutathione S-transferase domain-containing protein
Glutathione S-transferase domain {ECO:0000313|EMBL:ADU43266.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain DX-1).;"
SCNpilot_cont_300_bf_scaffold_4108_curated_4
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2861..3499)
DNA (639bp) protein (213aa)
Tetracycline repressor protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TUU8_9RHIZ
Tetracycline repressor protein {ECO:0000313|EMBL:ENN84244.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
tetracycline repressor protein
SCNpilot_cont_300_bf_scaffold_4108_curated_5
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3731..4762
DNA (1032bp) protein (344aa)
Tetracycline resistance protein, class A n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PJY3_9BURK
Tetracycline resistance protein, class A {ECO:0000313|EMBL:ELX11711.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
tetA; tetracycline resistance protein; K08151 MFS transporter, DHA1 family, tetracycline resistance protein rbh
SCNpilot_cont_300_bf_scaffold_4108_curated_6
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4769..5284)
DNA (516bp) protein (172aa)
ATPase AAA n=1 Tax=Kaistia granuli RepID=UPI000365EF3D
Recombination factor protein RarA {ECO:0000313|EMBL:AJD40958.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
rarA; recombination factor protein RarA
Displaying 6 items

View Taxonomy