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SCNpilot_cont_300_bf_scaffold_642_curated

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_642_curated_1
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..203)
DNA (201bp) protein (67aa)
ABC transporter n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HX81_9RHIZ
ABC transporter {ECO:0000313|EMBL:EPE97741.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
Fe(3+) ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_642_curated_2
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

565..822
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC84_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJC53011.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_642_curated_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(804..2048)
DNA (1245bp) protein (415aa)
Di-heme cytochrome c peroxidase; K00428 cytochrome c peroxidase [EC:1.11.1.5]
Di-heme cytochrome c peroxidase n=1 Tax=Burkholderia sp. YI23 RepID=G8M5K7_9BURK
Cytochrome C peroxidase {ECO:0000313|EMBL:KJC53012.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_300_bf_scaffold_642_curated_4
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2208..3779
DNA (1572bp) protein (524aa)
acid phosphatase n=1 Tax=Rhizobium loti RepID=UPI00036E8899
Acid phosphatase {ECO:0000313|EMBL:KJC61094.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
acid phosphatase rbh
SCNpilot_cont_300_bf_scaffold_642_curated_5
unknown

Not on your lists

4080..4349
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_642_curated_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4239..4658)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRJ1_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB73938.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4885..5748
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUL4_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74978.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6091..6891
DNA (801bp) protein (267aa)
Putative methyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXT6_RHITR
putative methyltransferase
Putative methyltransferase {ECO:0000313|EMBL:AGB74979.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6983..8017
DNA (1035bp) protein (345aa)
Prephenate dehydratase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXX3_RHITR
prephenate dehydratase
Prephenate dehydratase {ECO:0000313|EMBL:AGB74980.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8014..9444
DNA (1431bp) protein (477aa)
D-lactate dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW94_RHITR
D-lactate dehydrogenase
D-lactate dehydrogenase {ECO:0000313|EMBL:AGB74981.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9481..10701
DNA (1221bp) protein (407aa)
L-lactate dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUS3_RHITR
L-lactate dehydrogenase
L-lactate dehydrogenase {ECO:0000313|EMBL:AGB74982.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10739..11719
DNA (981bp) protein (327aa)
ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUL9_RHITR
ABC transporter, substrate-binding protein
ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB74983.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11716..12648
DNA (933bp) protein (311aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXT9_RHITR
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGB74984.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12645..13445
DNA (801bp) protein (267aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXY0_RHITR
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74985.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13405..14082
DNA (678bp) protein (226aa)
Transcriptional regulator, MarR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW98_RHITR
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AGB74986.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14620..15411)
DNA (792bp) protein (264aa)
Amino acid ABC transporter, ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V181_9RHIZ
Amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ENN86776.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative polar amino acid ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_642_curated_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15408..16076)
DNA (669bp) protein (223aa)
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6W1_9RHIZ
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ENN86777.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
polar amino acid ABC transporter inner membrane protein
SCNpilot_cont_300_bf_scaffold_642_curated_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16073..16714)
DNA (642bp) protein (214aa)
Putative polar amino acid ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZ12_RHITR
putative polar amino acid ABC transporter, permease protein
Putative polar amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGB75345.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16812..17639)
DNA (828bp) protein (276aa)
Putative polar amino acid ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXA9_RHITR
putative polar amino acid ABC transporter, substrate-binding protein
Putative polar amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB75346.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17869..18612
DNA (744bp) protein (248aa)
Transcriptional regulator, histidine utilization repressor, GntR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVT0_RHITR
transcriptional regulator, histidine utilization repressor, GntR family
Transcriptional regulator, histidine utilization repressor, GntR family {ECO:0000313|EMBL:AGB75347.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18609..19550
DNA (942bp) protein (314aa)
Transcriptional regulator, LysR family system transcriptional activator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V185_9RHIZ
Transcriptional regulator, LysR family system transcriptional activator {ECO:0000313|EMBL:ENN86781.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative LysR family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_642_curated_22
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19662..21002
DNA (1341bp) protein (447aa)
Putative nitrilotriacetate monooxygenase component A n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6W6_9RHIZ
Putative nitrilotriacetate monooxygenase component A {ECO:0000313|EMBL:ENN86782.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
nitrilotriacetate monooxygenase component A
SCNpilot_cont_300_bf_scaffold_642_curated_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21014..21553
DNA (540bp) protein (180aa)
Actinorhodin polyketide dimerase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZ17_RHITR
actinorhodin polyketide dimerase
Actinorhodin polyketide dimerase {ECO:0000313|EMBL:AGB75350.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21530..22693)
DNA (1164bp) protein (388aa)
Aminotransferase class I and II n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXB6_RHITR
aminotransferase class I and II
Aminotransferase class I and II {ECO:0000313|EMBL:AGB75351.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_25
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22790..23845
DNA (1056bp) protein (352aa)
Putative agmatinase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U2B6_9RHIZ
Putative agmatinase {ECO:0000313|EMBL:ENN86784.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative agmatinase
SCNpilot_cont_300_bf_scaffold_642_curated_26
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24185..25123
DNA (939bp) protein (313aa)
AgaE n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q987J3_RHILO
agaE protein, conversion of agropinic acid to mannopinic acid rbh
AgaE {ECO:0000313|EMBL:BAB53210.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_300_bf_scaffold_642_curated_27
Photorhabdus luminescens, Photorhabdus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25957..26709
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000371037B
Membrane protein {ECO:0000313|EMBL:KGM27287.1}; TaxID=29488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Photorhabdus.;" source="Photorhabdus luminescens (Xenorhabdus luminescens).;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_642_curated_28
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26745..27266)
DNA (522bp) protein (174aa)
Transposase IS204/IS1001/IS1096/IS1165 family protein (Fragment) n=1 Tax=Rhizobium sp. Pop5 RepID=K0VBD7_9RHIZ
Transposase IS204/IS1001/IS1096/IS1165 family protein {ECO:0000313|EMBL:EJZ16407.1}; Flags: Fragment;; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
putative ISL3 family transposase
SCNpilot_cont_300_bf_scaffold_642_curated_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27483..27659)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LK49_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB71788.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_642_curated_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27746..28111)
DNA (366bp) protein (122aa)
Natural resistance-associated macrophage protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWM9_RHITR
natural resistance-associated macrophage protein
Natural resistance-associated macrophage protein {ECO:0000313|EMBL:AGB75683.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 44 in total

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