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SCNpilot_cont_300_bf_scaffold_229_curated

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Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_229_curated_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1023)
DNA (1023bp) protein (341aa)
Multidrug efflux system protein n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FER5_9RHIZ
Multidrug efflux system protein {ECO:0000313|EMBL:CCV15772.1}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
multidrug efflux transporter protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_300_bf_scaffold_229_curated_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1033..2280)
DNA (1248bp) protein (416aa)
Resistance nodulation cell division (RND) drug efflux pump, MFP component n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRU0_RHITR
resistance nodulation cell division (RND) drug efflux pump, MFP component
Resistance nodulation cell division (RND) drug efflux pump, MFP component {ECO:0000313|EMBL:AGB72869.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_3
unknown

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comp(3157..3357)
DNA (201bp) protein (67aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_229_curated_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3637..4332)
DNA (696bp) protein (232aa)
Urea ABC transporter, ATP-binding protein UrtE n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWF6_RHITR
urtE; urea ABC transporter, ATP-binding protein UrtE
Urea ABC transporter, ATP-binding protein UrtE {ECO:0000313|EMBL:AGB75051.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4334..5089)
DNA (756bp) protein (252aa)
Urea ABC transporter, ATP-binding protein UrtD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUZ2_RHITR
urtD; urea ABC transporter, ATP-binding protein UrtD
Urea ABC transporter, ATP-binding protein UrtD {ECO:0000313|EMBL:AGB75052.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5094..6254)
DNA (1161bp) protein (387aa)
High-affinity branched-chain amino acid transport system permease protein LivM n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UUV0_9RHIZ
High-affinity branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:ENN85460.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
urtC; urea ABC transporter, permease protein UrtC
SCNpilot_cont_300_bf_scaffold_229_curated_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6251..7876)
DNA (1626bp) protein (542aa)
Inner-membrane translocator n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY12_RHITR
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:AGB75054.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7949..9238)
DNA (1290bp) protein (430aa)
ABC transporter, substrate binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY54_RHITR
ABC transporter, substrate binding protein
ABC transporter, substrate binding protein {ECO:0000313|EMBL:AGB75055.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9470..12850
DNA (3381bp) protein (1127aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWG1_RHITR
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:AGB75056.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
multi-sensor hybrid histidine kinase
SCNpilot_cont_300_bf_scaffold_229_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12852..13775
DNA (924bp) protein (308aa)
Transcriptional regulator, LuxR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUZ8_RHITR
transcriptional regulator, LuxR family
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGB75057.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13996..14793
DNA (798bp) protein (266aa)
Putative creatininase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWE7_RHITR
putative creatininase
Putative creatininase {ECO:0000313|EMBL:AGB75041.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14781..15749)
DNA (969bp) protein (323aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUY2_RHITR
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGB75042.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15934..16950
DNA (1017bp) protein (339aa)
NMT1/THI5 like-protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUT0_RHITR
NMT1/THI5 like-protein
NMT1/THI5 like-protein {ECO:0000313|EMBL:AGB75043.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17003..17827
DNA (825bp) protein (275aa)
ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY01_RHITR
ABC transporter, ATP-binding protein
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB75044.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17827..18693
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY44_RHITR
ABC transporter, permease protein
ABC transporter, permease protein {ECO:0000313|EMBL:AGB75045.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_16
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18693..20006
DNA (1314bp) protein (438aa)
Putative cytosine deaminase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UV46_9RHIZ
Putative cytosine deaminase {ECO:0000313|EMBL:ENN85535.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
cytosine deaminase
SCNpilot_cont_300_bf_scaffold_229_curated_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20008..21417
DNA (1410bp) protein (470aa)
FAD/FMN-dependent dehydrogenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUY7_RHITR
FAD/FMN-dependent dehydrogenase
FAD/FMN-dependent dehydrogenase {ECO:0000313|EMBL:AGB75047.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21414..21995
DNA (582bp) protein (194aa)
NAD(P)H dehydrogenase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUT6_RHITR
NAD(P)H dehydrogenase protein
NAD(P)H dehydrogenase protein {ECO:0000313|EMBL:AGB75048.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22959..23222
DNA (264bp) protein (88aa)
Hypothetical conserved protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PTS5_RHIE6
hypothetical protein
AbrB/SpoV domain-containing protein {ECO:0000313|EMBL:AIC28166.1}; TaxID=1432050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. IE4771.;"
SCNpilot_cont_300_bf_scaffold_229_curated_20
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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23219..23620
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1432049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. phaseoli str. IE4803.;"
NtrR protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000373869B
hypothetical protein; K07062
SCNpilot_cont_300_bf_scaffold_229_curated_21
unknown

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23620..23727
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_229_curated_22
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(23863..24165)
DNA (303bp) protein (101aa)
Main chromosome, complete sequence n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A7N8_RHIFH
Uncharacterized protein {ECO:0000313|EMBL:KDP75375.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
Lectin-like protein BA14k
SCNpilot_cont_300_bf_scaffold_229_curated_23
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24356..25774)
DNA (1419bp) protein (473aa)
UPI0003CFE949 related cluster n=1 Tax=unknown RepID=UPI0003CFE949
N5,N10-methylene tetrahydromethanopterin reductase {ECO:0000313|EMBL:ESZ11064.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
monooxygenase
SCNpilot_cont_300_bf_scaffold_229_curated_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26079..27032)
DNA (954bp) protein (318aa)
Diguanylate cyclase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY46_RHITR
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AGB75611.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27354..27884)
DNA (531bp) protein (177aa)
Chromate ion transporter (CHR) family protein, short-chain monodomain type n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWK5_RHITR
chromate ion transporter (CHR) family protein, short-chain monodomain type
Chromate ion transporter (CHR) family protein, short-chain monodomain type {ECO:0000313|EMBL:AGB75612.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27881..28447)
DNA (567bp) protein (189aa)
Chromate ion transporter (CHR) family protein, short-chain monodomain type n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWH2_RHITR
chromate ion transporter (CHR) family protein, short-chain monodomain type
Chromate ion transporter (CHR) family protein, short-chain monodomain type {ECO:0000313|EMBL:AGB75613.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28553..29479
DNA (927bp) protein (309aa)
Transcriptional regulator, LysR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZR2_RHITR
transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AGB75614.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_28
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29601..30479
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJS6_AGRRK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEA09099.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_300_bf_scaffold_229_curated_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30525..31271)
DNA (747bp) protein (249aa)
Polyphosphate glucokinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LZW1_RHITR
polyphosphate glucokinase
Polyphosphate glucokinase {ECO:0000313|EMBL:AGB75615.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_229_curated_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31304..33724)
DNA (2421bp) protein (807aa)
Glucan 1,4-alpha-glucosidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LY51_RHITR
glucan 1,4-alpha-glucosidase
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:AGB75616.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 85 in total

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