ggKbase home page

SCNpilot_cont_300_bf_scaffold_80_curated

Search features with annotation key words

Displaying items 1-30 of 533 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_80_curated_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..617)
DNA (615bp) protein (205aa)
Bifunctional protein FolD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ3_RHITR
bifunctional protein FolD
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(735..2666)
DNA (1932bp) protein (644aa)
Putative succinoglycan biosynthesis transport protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHE3_RHITR
putative succinoglycan biosynthesis transport protein
Putative succinoglycan biosynthesis transport protein {ECO:0000313|EMBL:AGB70106.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2766..3605)
DNA (840bp) protein (280aa)
N-acetyl mannosamine transferase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ82_RHITR
N-acetyl mannosamine transferase protein
N-acetyl mannosamine transferase protein {ECO:0000313|EMBL:AGB70105.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3839..4366)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ54_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70104.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4363..4731)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFE8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70103.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4746..5342)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFY8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70102.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5474..5893)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHE0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70101.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5963..6715)
DNA (753bp) protein (251aa)
Flagellar biosynthetic protein FliR n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ79_RHITR
fliR; flagellar biosynthetic protein FliR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6712..8799)
DNA (2088bp) protein (696aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ50_RHITR
flhA; flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:AGB70099.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8949..9215)
DNA (267bp) protein (89aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFE3_RHITR
fliQ; flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:AGB70098.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9245..9760)
DNA (516bp) protein (172aa)
Flagellar hook capping protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFY4_RHITR
flgD; flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:AGB70097.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9748..10200)
DNA (453bp) protein (151aa)
Probable flagellum biosynthesis repressor protein FlbT n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VB05_9RHIZ
Probable flagellum biosynthesis repressor protein FlbT {ECO:0000256|HAMAP-Rule:MF_00783}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
flbT; flagellar FlbT family protein
SCNpilot_cont_300_bf_scaffold_80_curated_13
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10197..10544)
DNA (348bp) protein (116aa)
Putative flagellar synthesis related protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UDK4_9RHIZ
Putative flagellar synthesis related protein {ECO:0000313|EMBL:ENN88248.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
flaF; flagellar biosynthesis regulatory protein FlaF
SCNpilot_cont_300_bf_scaffold_80_curated_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10582..11649)
DNA (1068bp) protein (356aa)
Flagellar hook-associated protein FlgL n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ45_RHITR
flgL; flagellar hook-associated protein FlgL
Flagellar hook-associated protein FlgL {ECO:0000313|EMBL:AGB70094.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11653..13155)
DNA (1503bp) protein (501aa)
Flagellar hook-associated protein FlgK n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFE0_RHITR
flgK; flagellar hook-associated protein FlgK
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:AGB70093.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_16
unknown

Not on your lists

comp(13180..13383)
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_80_curated_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13657..14328)
DNA (672bp) protein (224aa)
Putative transcription regulator protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6VB10_9RHIZ
Putative transcription regulator protein {ECO:0000313|EMBL:ENN88252.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
transcriptional regulator
SCNpilot_cont_300_bf_scaffold_80_curated_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14609..15196)
DNA (588bp) protein (196aa)
Lytic transglycosylase catalytic n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHD0_RHITR
lytic transglycosylase catalytic
Lytic transglycosylase catalytic {ECO:0000313|EMBL:AGB70091.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15144..16754)
DNA (1611bp) protein (537aa)
Chemotaxis motility protein MotD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ69_RHITR
motD; chemotaxis motility protein MotD
Chemotaxis motility protein MotD {ECO:0000313|EMBL:AGB70090.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16756..18060)
DNA (1305bp) protein (435aa)
Chemotaxis motility protein MotC n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ41_RHITR
motC; chemotaxis motility protein MotC
Chemotaxis motility protein MotC {ECO:0000313|EMBL:AGB70089.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18064..19473)
DNA (1410bp) protein (470aa)
Chemotaxis motility protein MotB n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFD6_RHITR
motB; chemotaxis motility protein MotB
Chemotaxis motility protein MotB {ECO:0000313|EMBL:AGB70088.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19470..20102)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFX5_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70087.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20347..21327)
DNA (981bp) protein (327aa)
Flagellin domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHC4_RHITR
flagellin domain-containing protein
Flagellin domain-containing protein {ECO:0000313|EMBL:AGB70086.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21584..22504)
DNA (921bp) protein (307aa)
Flagellin C protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ66_RHITR
flaC; flagellin C protein
Flagellin C protein {ECO:0000313|EMBL:AGB70085.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22961..24448
DNA (1488bp) protein (496aa)
Pyridoxal-dependent decarboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LJ36_RHITR
pyridoxal-dependent decarboxylase
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:AGB70084.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24442..25692
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFD2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB70083.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25806..26717)
DNA (912bp) protein (304aa)
Putative flagellin protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFX2_RHITR
putative flagellin protein
Putative flagellin protein {ECO:0000313|EMBL:AGB70082.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_80_curated_28
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26973..27884)
DNA (912bp) protein (304aa)
Flagellin C protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J975_AGRRK
flaCe; flagellin C protein
Flagellin C protein {ECO:0000313|EMBL:ACM25477.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_300_bf_scaffold_80_curated_29
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28216..30159
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UTG7_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84076.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
TPR repeat-containing protein
SCNpilot_cont_300_bf_scaffold_80_curated_30
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30263..31021)
DNA (759bp) protein (253aa)
Flagellar biosynthetic protein n=1 Tax=Rhizobium freirei PRF 81 RepID=U3H1H9_9RHIZ
Flagellar biosynthetic protein {ECO:0000313|EMBL:ENN84075.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
fliP; flagellar biosynthesis protein FliP; K02419 flagellar biosynthetic protein FliP
Displaying items 1-30 of 533 in total

View Taxonomy