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SCNpilot_cont_300_bf_scaffold_520_curated

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_520_curated_1
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(502..984)
DNA (483bp) protein (161aa)
AsnC family transcription regulator protein n=7 Tax=Legionella pneumophila RepID=G8UXZ2_LEGPN
AsnC family transcriptional regulator {ECO:0000313|EMBL:KGP62855.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
hypothetical protein; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
SCNpilot_cont_300_bf_scaffold_520_curated_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1307..2437
DNA (1131bp) protein (377aa)
Cys; K01739 cystathionine gamma-synthase [EC:2.5.1.48]
Cys n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IR74_RHOCS
Cys {ECO:0000313|EMBL:ACI97960.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
SCNpilot_cont_300_bf_scaffold_520_curated_3
Paracoccus aminophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2500..4059
DNA (1560bp) protein (520aa)
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Paracoccus aminophilus JCM 7686 RepID=S5XUK3_PARAH
ABC-type dipeptide transport system, periplasmic component
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AGT11174.1}; TaxID=1367847 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus aminophilus JCM 7686.;"
SCNpilot_cont_300_bf_scaffold_520_curated_4
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4148..5095
DNA (948bp) protein (316aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Verminephrobacter eiseniae (strain EF01-2) RepID=A1WEZ1_VEREI
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ABM56198.1}; Flags: Precursor;; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_300_bf_scaffold_520_curated_5
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5099..5914
DNA (816bp) protein (272aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7TC37_DESML
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EPR34110.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococcus multivorans DSM 2059.;"
binding-protein-dependent transport system inner membrane protein; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_300_bf_scaffold_520_curated_6
Rahnella aquatilis, Rahnella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5922..7583
DNA (1662bp) protein (554aa)
ABC transporter n=1 Tax=Rahnella aquatilis HX2 RepID=H8NQ42_RAHAQ
ABC transporter
ABC transporter {ECO:0000313|EMBL:AFE57930.1}; TaxID=1151116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Rahnella.;" source="Rahnella aquatilis HX2.;"
SCNpilot_cont_300_bf_scaffold_520_curated_7
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8025..8549
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI00037455D1
Urease-associated protein {ECO:0000313|EMBL:GAN51129.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_520_curated_8
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8741..9478)
DNA (738bp) protein (246aa)
DNA polymerase III subunit epsilon DnaQ-like protein {ECO:0000313|EMBL:AJD44731.1}; EC=2.7.7.7 {ECO:0000313|EMBL:AJD44731.1};; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
Exonuclease RNase T and DNA polymerase III; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Rhizobium mongolense RepID=UPI0003B3653E
SCNpilot_cont_300_bf_scaffold_520_curated_9
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9661..10305
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KEA04222.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_300_bf_scaffold_520_curated_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11409..12230)
DNA (822bp) protein (274aa)
ATP-dependent protease La n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWC2_RHITR
ATP-dependent protease La
ATP-dependent protease La {ECO:0000313|EMBL:AGB75537.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_520_curated_11
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12871..13071
DNA (201bp) protein (67aa)
antitoxin n=1 Tax=Rhizobium meliloti RepID=UPI00037E177B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJC64630.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_300_bf_scaffold_520_curated_12
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13152..13331)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=I9NDL3_RHILT
Uncharacterized protein {ECO:0000313|EMBL:KEC80195.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_520_curated_13
unknown

Not on your lists

comp(13347..13673)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_520_curated_14
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13903..14571)
DNA (669bp) protein (223aa)
Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TJZ4_9BRAD
Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis {ECO:0000313|EMBL:CCE06782.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
DSBA oxidoreductase
SCNpilot_cont_300_bf_scaffold_520_curated_15
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14590..15021)
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Methylosinus sp. LW4 RepID=UPI00037BD8DF
Uncharacterized protein {ECO:0000313|EMBL:KFL31828.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_520_curated_16
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15028..15675)
DNA (648bp) protein (216aa)
NmrA family protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LR00_BURGS
NmrA family protein
NmrA family protein {ECO:0000313|EMBL:AEA65167.1}; TaxID=999541 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (strain BSR3).;"
SCNpilot_cont_300_bf_scaffold_520_curated_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15786..16403)
DNA (618bp) protein (206aa)
acyl carrier protein phosphodiesterase; K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-]
FMN-dependent NADH-azoreductase {ECO:0000255|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000255|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000255|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01216}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
FMN-dependent NADH-azoreductase n=1 Tax=Methylosinus trichosporium OB3b RepID=D5QTW3_METTR
SCNpilot_cont_300_bf_scaffold_520_curated_18
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16490..16867
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VTG2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ22096.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_520_curated_19
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17215..18360)
DNA (1146bp) protein (382aa)
Putative ROK family transcriptional regulator n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V173_9RHIZ
Putative ROK family transcriptional regulator {ECO:0000313|EMBL:ENN86766.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
ROK-family transcriptional regulator
SCNpilot_cont_300_bf_scaffold_520_curated_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18560..19837
DNA (1278bp) protein (426aa)
Putative ABC transporter, periplasmic solute-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6V6V2_9RHIZ
Putative ABC transporter, periplasmic solute-binding protein {ECO:0000313|EMBL:ENN86767.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative amino acid ABC transporter, substrate-binding protein
SCNpilot_cont_300_bf_scaffold_520_curated_21
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19957..20832
DNA (876bp) protein (292aa)
Binding protein-protein-dependent transport system inner membrane component n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U947_9RHIZ
Binding protein-protein-dependent transport system inner membrane component {ECO:0000313|EMBL:ENN86768.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative amino acid ABC transporter, permease protein
SCNpilot_cont_300_bf_scaffold_520_curated_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20832..21683
DNA (852bp) protein (284aa)
Putative amino acid ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSF8_RHITR
putative amino acid ABC transporter, permease protein
Putative amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGB74162.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_520_curated_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21723..22874
DNA (1152bp) protein (384aa)
Putative ATP-binding protein component of ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UYM5_9RHIZ
Putative ATP-binding protein component of ABC transporter {ECO:0000313|EMBL:ENN86770.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative amino acid ABC transporter, ATP-binding protein
SCNpilot_cont_300_bf_scaffold_520_curated_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22892..25033
DNA (2142bp) protein (714aa)
Beta-galactosidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVL6_RHITR
beta-D-galactosidase protein
Beta-D-galactosidase protein {ECO:0000313|EMBL:AGB74160.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_300_bf_scaffold_520_curated_25
unknown

Not on your lists

comp(25653..26165)
DNA (513bp) protein (171aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_520_curated_26
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26344..26913)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. IRBG74 RepID=U4PZJ1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KJF71021.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
hypothetical protein
SCNpilot_cont_300_bf_scaffold_520_curated_27
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27233..28672)
DNA (1440bp) protein (480aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1); K01744 aspartate ammonia-lyase [EC:4.3.1.1]
Probable aspartate ammonia-lyase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q459_RHIE6
Aspartate ammonia-lyase {ECO:0000313|EMBL:AHK47239.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_cont_300_bf_scaffold_520_curated_28
unknown

Not on your lists

comp(28758..28856)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_520_curated_29
unknown

Not on your lists

comp(28853..28960)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_520_curated_30
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28974..30140)
DNA (1167bp) protein (389aa)
putative amidohydrolase; K01451 hippurate hydrolase [EC:3.5.1.32]
Hippurate hydrolase HipO n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EY62_9RHIZ
Amidohydrolase {ECO:0000313|EMBL:EZQ14259.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
Displaying items 1-30 of 39 in total

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